FFCP PHASE1:Hg19::chr6:15246261..15246312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3720 | |EntrezGene=3720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6196 | |HGNC=6196 | ||
|TSSclassifier=strong | |||
|UniProt=Q92833 | |UniProt=Q92833 | ||
|association_with_transcript=-214bp_to_ENST00000341776,NM_004973,uc003nbj.2_5end | |association_with_transcript=-214bp_to_ENST00000341776,NM_004973,uc003nbj.2_5end | ||
|cluster_id=chr6:15246261..15246312,+ | |||
|coexpression_cluster_id=C1915 | |coexpression_cluster_id=C1915 | ||
|description=CAGE_peak_1_at_JARID2_5end | |description=CAGE_peak_1_at_JARID2_5end | ||
|id=chr6:15246261..15246312,+ | |id=chr6:15246261..15246312,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.76e-19;33!CL:0002057;1.76e-19;33!CL:0000473;1.03e-16;39!CL:0000234;1.03e-16;39!CL:0000576;1.71e-16;48!CL:0000766;6.87e-15;69!CL:0000763;5.62e-13;100!CL:0000738;2.58e-09;136!CL:0002087;1.04e-08;104!CL:0000988;9.81e-08;177!CL:0000094;8.56e-07;8 | |ontology_enrichment_celltype=CL:0000037!8.19e-46!172;CL:0000566!8.19e-46!172;CL:0002032!7.96e-42!165;CL:0000837!7.96e-42!165;CL:0000763!1.58e-40!112;CL:0000049!1.58e-40!112;CL:0000988!6.04e-39!182;CL:0000738!1.24e-35!140;CL:0000766!7.54e-31!76;CL:0002031!3.79e-28!124;CL:0000557!3.34e-27!71;CL:0000839!2.52e-26!70;CL:0002057!3.68e-25!42;CL:0002087!3.93e-25!119;CL:0002009!7.97e-24!65;CL:0002194!9.07e-23!63;CL:0000576!9.07e-23!63;CL:0000040!9.07e-23!63;CL:0000559!9.07e-23!63;CL:0000860!3.98e-21!45;CL:0000094!8.61e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.76e-19;33!CL:0002057;1.76e-19;33!CL:0000473;1.03e-16;39!CL:0000234;1.03e-16;39!CL:0000576;1.71e-16;48!CL:0000766;6.87e-15;69!CL:0000763;5.62e-13;100!CL:0000738;2.58e-09;136!CL:0002087;1.04e-08;104!CL:0000988;9.81e-08;177!CL:0000094;8.56e-07;8 | ||
|ontology_enrichment_disease=DOID:8692;3.88e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000037,2.64e-48,168;CL:0002032,3.08e-44,161;CL:0000837,3.08e-44,161;CL:0000763,1.15e-43,108;CL:0000049,1.15e-43,108;CL:0000988,6.34e-42,177;CL:0000738,4.61e-38,136;CL:0000766,2.62e-34,72;CL:0000557,1.60e-30,67;CL:0002031,2.13e-30,120;CL:0000839,1.33e-29,66;CL:0002087,2.84e-27,115;CL:0002009,4.80e-27,61;CL:0002194,5.87e-26,59;CL:0000576,5.87e-26,59;CL:0000040,5.87e-26,59;CL:0000559,5.87e-26,59;CL:0000473,1.88e-25,48;CL:0000234,1.88e-25,48;CL:0000860,3.68e-25,42;CL:0002057,3.68e-25,42;CL:0000094,8.61e-07,8 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;2.09e-18;42!CL:0000049;6.25e-12;108 | ||
|ontology_enrichment_disease=DOID:8692!2.08e-07!31;DOID:1240!4.27e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.88e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.08e-07,31;DOID:1240,4.27e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.11e-25!102;UBERON:0003061!4.11e-25!102;UBERON:0002193!9.53e-22!112;UBERON:0002371!2.23e-21!80;UBERON:0001474!2.77e-21!86;UBERON:0004765!1.34e-15!101;UBERON:0001434!1.34e-15!101;UBERON:0002405!6.27e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-27,98;UBERON:0003061,1.68e-27,98;UBERON:0002371,6.42e-24,76;UBERON:0002193,9.11e-24,108;UBERON:0001474,1.10e-23,82;UBERON:0002405,6.69e-21,93;UBERON:0004765,1.17e-19,90;UBERON:0001434,1.09e-15,100 | |||
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67112 | ||
|short_description=p1@JARID2 | |short_description=p1@JARID2 | ||
}} | }} |
Latest revision as of 06:09, 16 September 2015
Short description: | p1@JARID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JARID2_5end |
Coexpression cluster: | C1915_Mast_CD14_testicular_Eosinophils_Neutrophils_Basophils_Peripheral |
Association with transcript: | -214bp_to_ENST00000341776, NM_004973, uc003nbj.2_5end |
EntrezGene: | JARID2 |
HGNC: | 6196 |
UniProt: | Q92833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.64e-48 | 168 |
hematopoietic oligopotent progenitor cell | 3.08e-44 | 161 |
hematopoietic multipotent progenitor cell | 3.08e-44 | 161 |
myeloid cell | 1.15e-43 | 108 |
common myeloid progenitor | 1.15e-43 | 108 |
hematopoietic cell | 6.34e-42 | 177 |
leukocyte | 4.61e-38 | 136 |
myeloid leukocyte | 2.62e-34 | 72 |
granulocyte monocyte progenitor cell | 1.60e-30 | 67 |
hematopoietic lineage restricted progenitor cell | 2.13e-30 | 120 |
myeloid lineage restricted progenitor cell | 1.33e-29 | 66 |
nongranular leukocyte | 2.84e-27 | 115 |
macrophage dendritic cell progenitor | 4.80e-27 | 61 |
monopoietic cell | 5.87e-26 | 59 |
monocyte | 5.87e-26 | 59 |
monoblast | 5.87e-26 | 59 |
promonocyte | 5.87e-26 | 59 |
defensive cell | 1.88e-25 | 48 |
phagocyte | 1.88e-25 | 48 |
classical monocyte | 3.68e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.68e-25 | 42 |
granulocyte | 8.61e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-27 | 98 |
blood island | 1.68e-27 | 98 |
bone marrow | 6.42e-24 | 76 |
hemolymphoid system | 9.11e-24 | 108 |
bone element | 1.10e-23 | 82 |
immune system | 6.69e-21 | 93 |
skeletal element | 1.17e-19 | 90 |
skeletal system | 1.09e-15 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.08e-07 | 31 |
leukemia | 4.27e-07 | 39 |