FFCP PHASE1:Hg19::chr12:110434021..110434034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9815 | |EntrezGene=9815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4273 | |HGNC=4273 | ||
|TSSclassifier=strong | |||
|UniProt=Q14161,F5H882,F8VXI9,F8VVT4 | |UniProt=Q14161,F5H882,F8VXI9,F8VVT4 | ||
|association_with_transcript=0bp_to_ENST00000355312,ENST00000542273,ENST00000550186,ENST00000551209,ENST00000551494_5end | |association_with_transcript=0bp_to_ENST00000355312,ENST00000542273,ENST00000550186,ENST00000551209,ENST00000551494_5end | ||
|cluster_id=chr12:110434021..110434034,- | |||
|coexpression_cluster_id=C3220 | |coexpression_cluster_id=C3220 | ||
|description=CAGE_peak_7_at_GIT2_5end | |description=CAGE_peak_7_at_GIT2_5end | ||
|id=chr12:110434021..110434034,- | |id=chr12:110434021..110434034,- | ||
|ontology_enrichment_celltype=CL:0000037!8.04e-36!172;CL:0000566!8.04e-36!172;CL:0000988!7.37e-34!182;CL:0000738!2.26e-32!140;CL:0002032!3.78e-31!165;CL:0000837!3.78e-31!165;CL:0000542!5.64e-28!53;CL:0000051!5.64e-28!53;CL:0002087!1.72e-27!119;CL:0000838!3.19e-27!52;CL:0002031!1.62e-24!124;CL:0000945!8.33e-14!24;CL:0000826!8.33e-14!24;CL:0000791!1.52e-13!18;CL:0000789!1.52e-13!18;CL:0002420!1.52e-13!18;CL:0002419!1.52e-13!18;CL:0000790!1.52e-13!18;CL:0000084!2.58e-12!25;CL:0000827!2.58e-12!25;CL:0000236!6.52e-11!14;CL:0000763!4.20e-09!112;CL:0000049!4.20e-09!112;CL:0000625!1.23e-08!11;CL:0000766!6.01e-07!76 | |ontology_enrichment_celltype=CL:0000037!8.04e-36!172;CL:0000566!8.04e-36!172;CL:0000988!7.37e-34!182;CL:0000738!2.26e-32!140;CL:0002032!3.78e-31!165;CL:0000837!3.78e-31!165;CL:0000542!5.64e-28!53;CL:0000051!5.64e-28!53;CL:0002087!1.72e-27!119;CL:0000838!3.19e-27!52;CL:0002031!1.62e-24!124;CL:0000945!8.33e-14!24;CL:0000826!8.33e-14!24;CL:0000791!1.52e-13!18;CL:0000789!1.52e-13!18;CL:0002420!1.52e-13!18;CL:0002419!1.52e-13!18;CL:0000790!1.52e-13!18;CL:0000084!2.58e-12!25;CL:0000827!2.58e-12!25;CL:0000236!6.52e-11!14;CL:0000763!4.20e-09!112;CL:0000049!4.20e-09!112;CL:0000625!1.23e-08!11;CL:0000766!6.01e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.42e-26;53!CL:0000236;1.36e-22;13!CL:0000791;7.88e-22;18!CL:0000789;7.88e-22;18!CL:0002419;7.88e-22;18!CL:0000084;4.73e-21;25!CL:0000945;4.12e-17;24!CL:0000624;4.19e-12;6!CL:0000094;2.47e-11;8!CL:0000625;1.11e-10;11!CL:0000988;1.93e-08;177!CL:0000451;6.16e-08;10!CL:0000081;6.81e-08;11!CL:0000784;1.04e-07;3!CL:0000738;1.11e-07;136!CL:0000840;1.30e-07;5!CL:0002087;2.06e-07;104!CL:0000623;3.04e-07;3!CL:0000775;5.01e-07;3!CL:0000226;8.86e-07;3!CL:0000842;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.46e-44,53;CL:0000051,3.46e-44,53;CL:0000838,1.57e-42,52;CL:0000037,2.62e-42,168;CL:0000988,8.99e-42,177;CL:0000738,4.84e-39,136;CL:0002032,6.16e-34,161;CL:0000837,6.16e-34,161;CL:0002087,2.98e-28,115;CL:0002031,1.20e-23,120;CL:0000791,7.14e-22,18;CL:0000789,7.14e-22,18;CL:0002420,7.14e-22,18;CL:0002419,7.14e-22,18;CL:0000790,7.14e-22,18;CL:0000084,3.55e-21,25;CL:0000827,3.55e-21,25;CL:0000236,5.05e-21,14;CL:0000945,2.81e-17,24;CL:0000826,2.81e-17,24;CL:0000624,2.86e-12,6;CL:0000094,9.93e-12,8;CL:0000625,1.04e-10,11;CL:0000134,2.11e-10,354;CL:0002320,7.45e-10,361;CL:0000451,2.98e-08,10;CL:0000081,3.62e-08,11;CL:0000840,4.95e-08,5;CL:0001029,4.95e-08,5;CL:0000219,5.89e-08,386;CL:0000784,1.05e-07,3;CL:0000623,3.13e-07,3;CL:0000825,3.13e-07,3;CL:0000775,3.98e-07,3;CL:0000226,8.93e-07,3;CL:0000842,8.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-26;53!CL:0000790;7.88e-22;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;7.59e-07;51!DOID:0060083;7.59e-07;51!DOID:0060058;8.64e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.15e-08,51;DOID:0060083,1.15e-08,51;DOID:0060058,9.39e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.35e-10!102;UBERON:0003061!5.35e-10!102;UBERON:0002193!6.55e-08!112;UBERON:0000178!5.93e-07!15;UBERON:0000179!5.93e-07!15;UBERON:0000463!5.93e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!5.35e-10!102;UBERON:0003061!5.35e-10!102;UBERON:0002193!6.55e-08!112;UBERON:0000178!5.93e-07!15;UBERON:0000179!5.93e-07!15;UBERON:0000463!5.93e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-10;15!UBERON:0000179;2.51e-10;15!UBERON:0000463;2.51e-10;15!UBERON:0002390;6.71e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.75e-10,15;UBERON:0000179,4.75e-10,15;UBERON:0000463,4.75e-10,15;UBERON:0002384,4.11e-09,371;UBERON:0002370,3.77e-08,4;UBERON:0005058,3.77e-08,4;UBERON:0009113,3.77e-08,4;UBERON:0003295,3.77e-08,4;UBERON:0005562,3.77e-08,4;UBERON:0002390,5.27e-07,98;UBERON:0003061,5.27e-07,98;UBERON:0004177,9.98e-07,7;UBERON:0005057,9.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,1.96682138424452,5.37361157336098,1.70297735647684,0,0,0,8.05658886035137,2.13253848731132,2.64240395401362,2.76997704265939,1.40381113229099,0.651032612147555,0.223915474239924,0,0.257575567634187,0.436194716338694,0,0.485168122375632,0.929716147622738,0,0.619412741790207,0,0.512321413058201,0,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,1.0429658368404,0.868755378820466,0,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0.112328631146495,0.450530678524519,0.32145117339416,0.570025487482497,0,0.730656615058536,1.75996244461323,2.18455444504853,2.66852776159066,3.41384178053206,1.60158394814405,2.29900975981793,1.32208974556972,2.86216126360609,3.98449078376614,6.45960908308033,6.88091810625412,1.32171328579026,5.04457706683382,2.10707267820062,7.67168103443949,8.25322601773246,6.16804496998528,1.33749196312542,2.93330039970231,1.4203434172042,5.84480185223734,1.55974639639243,2.06224135232386,1.32920336750173,2.97884250141517,0.640456598628376,0.650296737799391,0.657751618414705,1.65810010671509,1.73881851441031,2.07601188426885,1.07016331235885,2.09071047609954,1.35971211237079,1.91610246800961,1.37450978193052,3.03623630423403,2.54852331459277,3.90650072313851,0.950452044448374,0.903450714466637,1.53583933385302,2.49861453104692,2.36777252044017,0.821127996921047,6.45141578319144,7.2208852861547,4.34473211648397,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,1.9472843619281,1.91542711029194,1.46253756570752,13.3554749610991,19.4478269665243,21.9159925784443,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0,0,1.53316637465883,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.412210116953756,0,0.37223371266318,0.168776332241266,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0.487894824518382,0.132529768321485,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.63802985597466,0.594524649154913,0,0,0,0,0,0,2.46331618947972,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,1.12085143993527,3.74358444383662,6.90008239550455,5.00537841491019,0,1.30139853857622,0,0.335032530668698,0,5.24304916763028,2.99161459204025,5.38740167466846,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,5.16920065307218,2.37285620900479,2.77491650288955,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.330569830721956,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,2.53723804616085,0,0.569647187174163,1.19115887728894,1.23408681925858,1.29694662238543,0,0.79312517629427,0,0,0,3.71606350251437,1.58696134274089,2.84567373393656,1.4348364545594,1.1974762285969,0.957526850661834,1.05836791361941,0.324621940274555,1.68478306868075,0.456469358066384,1.09675927041116,0,1.01575066680962,0.481764225311099,0,0,1.03051603426729,0,0,0,0,0,1.23087398947712,0,1.33228787199128,1.4098700508785,0,0,0,0,0,0,0.296964680832639,0,0,0,0.222617410045812,0.329607748453519,0,0,1.10513566212459,0,0.306806047506464,0.492339221844278,0,0.269605053441981,0,0,0,2.3948309234694,0,0.969332746095218,0.278304294485554,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0.583209226766509,0,1.77148277162768,0.723578631752448,0,0.110579259931225,0.591095237907095,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0.784901281975124,0.332423363800313,0,0.19606253431774,0,0,0.476809736941136,0.210998064528027,0.163232808159148,0,0.432777279484182,0,0.0884575645033392,0,0.889563386041866,1.23563938946503,1.25306339406546,0.067401132980677,0,0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| ||
|short_description=p7@GIT2 | |short_description=p7@GIT2 | ||
}} | }} |
Latest revision as of 07:36, 16 September 2015
Short description: | p7@GIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GIT2_5end |
Coexpression cluster: | C3220_Dendritic_Burkitt_thymus_CD4_CD34_lymphoma_CD8 |
Association with transcript: | 0bp_to_ENST00000355312, ENST00000542273, ENST00000550186, ENST00000551209, ENST00000551494_5end |
EntrezGene: | GIT2 |
HGNC: | 4273 |
UniProt: | Q14161F5H882F8VXI9F8VVT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.75e-10 | 15 |
haemolymphatic fluid | 4.75e-10 | 15 |
organism substance | 4.75e-10 | 15 |
connective tissue | 4.11e-09 | 371 |
thymus | 3.77e-08 | 4 |
hemolymphoid system gland | 3.77e-08 | 4 |
thymic region | 3.77e-08 | 4 |
pharyngeal gland | 3.77e-08 | 4 |
thymus primordium | 3.77e-08 | 4 |
hematopoietic system | 5.27e-07 | 98 |
blood island | 5.27e-07 | 98 |
hemopoietic organ | 9.98e-07 | 7 |
immune organ | 9.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.15e-08 | 51 |
immune system cancer | 1.15e-08 | 51 |
lymphoma | 9.39e-07 | 10 |