FFCP PHASE1:Hg19::chr10:111765588..111765603,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:111765588..111765603,+ to FFCP PHASE1:Hg19::chr10:111765588..111765603,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000360162_5end | |||
|cluster_id=chr10:111765588..111765603,+ | |||
|coexpression_cluster_id=C2034 | |||
|description=CAGE_peak_8_at_ADD3_5end | |||
|id=chr10:111765588..111765603,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.44e-25!180;CL:0000057!3.89e-17!75;CL:0000680!1.55e-14!57;CL:0000056!1.55e-14!57;CL:0000355!1.55e-14!57;CL:0000187!8.23e-14!54;CL:0000183!2.19e-13!59;CL:0000393!1.45e-10!60;CL:0000211!1.45e-10!60;CL:0000192!2.63e-09!42;CL:0000514!2.63e-09!42;CL:0002620!1.67e-07!23;CL:0000359!3.97e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000187;2.68e-08;55!CL:0002620;1.14e-07;23!CL:0000393;2.84e-07;61!CL:0000211;2.84e-07;61!CL:0000192;3.90e-07;43!CL:0000057;4.32e-07;73!CL:0002570;6.62e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-18,76;CL:0000680,3.25e-15,58;CL:0000056,3.25e-15,58;CL:0000355,3.25e-15,58;CL:0000187,2.34e-14,55;CL:0000393,1.70e-11,61;CL:0000211,1.70e-11,61;CL:0000192,3.38e-09,43;CL:0000514,3.38e-09,43;CL:0002620,1.97e-07,23;CL:0002570,8.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;2.53e-08;58!CL:0000514;3.90e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.10e-18!83;UBERON:0002329!7.10e-18!83;UBERON:0003077!7.10e-18!83;UBERON:0003059!7.10e-18!83;UBERON:0007282!7.10e-18!83;UBERON:0009618!7.10e-18!83;UBERON:0007285!7.10e-18!83;UBERON:0000475!5.99e-17!365;UBERON:0002385!8.51e-17!63;UBERON:0001015!8.51e-17!63;UBERON:0000383!8.51e-17!63;UBERON:0004290!1.35e-16!70;UBERON:0001134!5.76e-16!61;UBERON:0002036!5.76e-16!61;UBERON:0003082!5.76e-16!61;UBERON:0007023!4.42e-15!115;UBERON:0000481!4.74e-14!347;UBERON:0000486!1.88e-13!82;UBERON:0005256!3.60e-12!143;UBERON:0000468!8.43e-10!659;UBERON:0000119!3.53e-09!312;UBERON:0002100!7.06e-09!216;UBERON:0000477!1.39e-08!286;UBERON:0000483!1.41e-08!309;UBERON:0000948!1.81e-07!24;UBERON:0005498!1.81e-07!24;UBERON:0004140!1.81e-07!24;UBERON:0009881!1.81e-07!24;UBERON:0004141!1.81e-07!24;UBERON:0003084!1.81e-07!24;UBERON:0007005!1.81e-07!24;UBERON:0004139!1.81e-07!24;UBERON:0004291!1.81e-07!24;UBERON:0000467!2.20e-07!625;UBERON:0000480!3.01e-07!626;UBERON:0001135!3.06e-07!15;UBERON:0001013!4.67e-07!14;UBERON:0003104!6.02e-07!238;UBERON:0009142!6.02e-07!238;UBERON:0007100!7.82e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.50e-13;31!UBERON:0001015;1.50e-13;31!UBERON:0000383;1.50e-13;31!UBERON:0001013;2.07e-08;14!UBERON:0001135;3.00e-08;15!UBERON:0002204;1.44e-07;70!UBERON:0001134;3.50e-07;16!UBERON:0002036;3.50e-07;16!UBERON:0000948;4.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003077,2.10e-18,72;UBERON:0007285,2.10e-18,72;UBERON:0002329,5.52e-18,71;UBERON:0003059,5.52e-18,71;UBERON:0007282,5.52e-18,71;UBERON:0004290,5.52e-18,71;UBERON:0009618,5.52e-18,71;UBERON:0007524,7.09e-18,73;UBERON:0002385,7.60e-18,64;UBERON:0001015,7.60e-18,64;UBERON:0000383,7.60e-18,64;UBERON:0001134,7.00e-17,62;UBERON:0002036,7.00e-17,62;UBERON:0003082,7.00e-17,62;UBERON:0007503,1.23e-14,78;UBERON:0000486,1.57e-14,83;UBERON:0003104,9.01e-12,160;UBERON:0009142,9.01e-12,160;UBERON:0005256,1.26e-11,122;UBERON:0007023,1.92e-09,114;UBERON:0001135,2.30e-08,15;UBERON:0001013,2.51e-08,14;UBERON:0000948,8.31e-08,24;UBERON:0005498,8.31e-08,24;UBERON:0004140,8.31e-08,24;UBERON:0009881,8.31e-08,24;UBERON:0004141,8.31e-08,24;UBERON:0003084,8.31e-08,24;UBERON:0007005,8.31e-08,24;UBERON:0004139,8.31e-08,24;UBERON:0004291,8.31e-08,24;UBERON:0000479,1.20e-07,773;UBERON:0003102,7.45e-07,99 | |||
|phase1_expression=2.36181893051724,1.71280419112787,3.94672331468719,0,0.446961094427288,4.36169262050184,0,8.84407822797563,3.91778442299758,0.245733936501509,0,0,0.527533956456907,15.3470277670458,7.29074226601415,3.36162573225888,6.02694528023977,1.46062018077475,5.85519358548608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,10.7312137552582,7.28816602508123,2.53007406669196,1.50401373190767,0.869079113764942,1.5905718941022,4.86634870302636,0.661743720148475,0.221729397462564,0.43917392846563,4.45328856692223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.44246708221105,3.41902381494365,9.66587019936497,12.6208113129478,8.86670955495893,3.36406560085384,0,0,14.626918663789,0.808264032418128,4.90385709340376,8.02194366518136,20.1661573568,0.937285727335186,5.30672130611545,2.2818872861778,5.52960118041664,1.87895197830024,1.13311061057692,1.40450806702248,8.57447519270552,1.22834317311768,18.495314830462,3.56400857184616,4.45080472701402,1.82032272387605,2.15585442544872,1.85169725349473,2.50237039743928,3.04770527032601,3.95079858792754,3.0648779579902,3.75595147266492,1.58805056424029,1.61450672119976,3.84403299873421,2.33125091275518,1.80054657650641,6.59536187126009,3.09168648054755,3.35010341396862,2.70042131586026,0.876933046450788,3.28163906517349,5.43094401989566,16.8111899091564,1.06502877754984,0.604512589365842,1.52604533079439,0,0,0,0.121973706129595,0,0.232387885739037,0.621966330092223,0.504641701751257,0,0,1.28648187638577,0,11.6091982007995,10.8281922250438,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,3.93563003337963,1.71567810298526,0,0,0,0.185176890317059,0,0,1.44331342025273,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0.571652865261156,1.90622843387113,2.1798003441664,5.5737097223922,1.55126058909333,3.57656445851882,5.071816515336,0.531876233169741,1.04007436911366,0.257207374262142,0,0,2.28764789853036,0,0,4.23457039581856,1.42156779497018,0.791951872933429,3.01439377059586,0.871533458600294,0.599837947092342,0,0,0,1.4377491329495,1.14861935834114,2.85273810081437,4.1986578933598,1.2328579353023,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,18.0356492827136,8.00272833695483,9.76554085319048,1.87173775377726,2.67643483195743,2.52323864054295,8.31704046448264,5.11608369537122,0,3.10419213877515,1.99267679560631,1.84369168541703,8.77524506127637,1.17480694477644,1.71571711905428,0,0,0,0,0,0.30239029332968,3.96972492510043,4.910783145218,1.40330047216537,4.22859192543813,1.53512174720011,3.05622450172854,1.48418066444991,2.7757744884478,2.13074070375753,4.68124789278712,6.23105315020345,2.90525946149898,2.77976734060731,0,0,1.26295892981067,5.82691737621495,3.2781103739856,0,0.539107359730903,0,0,0.633309773357254,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,1.54561517471583,0.366277859273374,0.165018999841176,0,0.650060246036521,16.068392984416,1.93341436584244,3.54311819363682,3.68408819342711,1.7918754422989,7.94909812025225,2.46528379654188,2.89770533214743,1.51354460599453,0,0,0,0,10.6914476338376,5.98143458978216,4.8792608911242,1.54016790088044,1.59691809095107,3.47973196830029,1.8532421910392,1.00187420719394,5.95453390975468,7.90948561796815,2.85945290885737,0.511795582622668,8.98671874871233,15.9101623962968,0,2.15846949099978,3.56898138656871,2.47406044925942,2.02182481573316,0,3.37006764991185,0,3.89941583410055,0,4.23149725364756,2.12108147930569,4.52032466480971,3.85955740482287,0.66343897524122,2.19225442626881,1.15755106853338,26.2357900818653,0,0.30982349809975,0.845086807596724,1.43411352204052,0.589494246078727,0.35667105148125,7.44998234548255,5.2776908824416,13.1717957183961,0.75894634753143,1.04980416073495,0,0,0,1.41215701165169,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,2.3874448473769,0,3.07160702099232,0.994147647766298,1.68803299692615,0.333926115068718,0,0,4.78195171802567,1.93398740871803,0,0.102268682502155,0,2.48831670129446,0,0,0,7.39825542277002,0,3.33410970433911,1.93866549219044,1.85536196323703,0,0,0,3.62499787717397,0,0,0,0,0.291604613383254,0,1.77148277162768,0.844175070377856,0,0.442317039724898,0,3.51016635446356,0,0,7.61807559187591,0.683652335082007,0,0,0,1.5950057986596,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,1.99052386215701,2.0345239835768,5.49927130440263,0,0,0,2.49384192028505,8.82835412028668,0.937057782901357,0,0,0,7.89168805698781,2.41981432097328,1.53036380815245,3.22251556105289,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,6.46488672495512,0,0,0,0,6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| ||
|short_description=p8@ADD3 | |||
}} | }} |
Latest revision as of 07:42, 16 September 2015
Short description: | p8@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ADD3_5end |
Coexpression cluster: | C2034_mesenchymal_Synoviocyte_Fibroblast_Preadipocyte_Nucleus_Cardiac_Smooth |
Association with transcript: | 26bp_to_ENST00000360162_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-18 | 76 |
muscle precursor cell | 3.25e-15 | 58 |
myoblast | 3.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.25e-15 | 58 |
muscle cell | 2.34e-14 | 55 |
electrically responsive cell | 1.70e-11 | 61 |
electrically active cell | 1.70e-11 | 61 |
smooth muscle cell | 3.38e-09 | 43 |
smooth muscle myoblast | 3.38e-09 | 43 |
skin fibroblast | 1.97e-07 | 23 |
mesenchymal stem cell of adipose | 8.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
paraxial mesoderm | 2.10e-18 | 72 |
presumptive paraxial mesoderm | 2.10e-18 | 72 |
somite | 5.52e-18 | 71 |
presomitic mesoderm | 5.52e-18 | 71 |
presumptive segmental plate | 5.52e-18 | 71 |
dermomyotome | 5.52e-18 | 71 |
trunk paraxial mesoderm | 5.52e-18 | 71 |
dense mesenchyme tissue | 7.09e-18 | 73 |
muscle tissue | 7.60e-18 | 64 |
musculature | 7.60e-18 | 64 |
musculature of body | 7.60e-18 | 64 |
skeletal muscle tissue | 7.00e-17 | 62 |
striated muscle tissue | 7.00e-17 | 62 |
myotome | 7.00e-17 | 62 |
epithelial vesicle | 1.23e-14 | 78 |
multilaminar epithelium | 1.57e-14 | 83 |
mesenchyme | 9.01e-12 | 160 |
entire embryonic mesenchyme | 9.01e-12 | 160 |
trunk mesenchyme | 1.26e-11 | 122 |
adult organism | 1.92e-09 | 114 |
smooth muscle tissue | 2.30e-08 | 15 |
adipose tissue | 2.51e-08 | 14 |
heart | 8.31e-08 | 24 |
primitive heart tube | 8.31e-08 | 24 |
primary heart field | 8.31e-08 | 24 |
anterior lateral plate mesoderm | 8.31e-08 | 24 |
heart tube | 8.31e-08 | 24 |
heart primordium | 8.31e-08 | 24 |
cardiac mesoderm | 8.31e-08 | 24 |
cardiogenic plate | 8.31e-08 | 24 |
heart rudiment | 8.31e-08 | 24 |
tissue | 1.20e-07 | 773 |
surface structure | 7.45e-07 | 99 |