FFCP PHASE1:Hg19::chr2:241544834..241544861,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:241544834..241544861,+ to FFCP PHASE1:Hg19::chr2:241544834..241544861,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2859 | |EntrezGene=2859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4492 | |HGNC=4492 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC97 | |UniProt=Q9HC97 | ||
|association_with_transcript=0bp_to_ENST00000319838,ENST00000403859,ENST00000438013,uc010fzh.1,uc010fzi.1_5end | |||
|cluster_id=chr2:241544834..241544861,+ | |||
|coexpression_cluster_id=C2192 | |||
|description=CAGE_peak_2_at_GPR35_5end | |||
|id=chr2:241544834..241544861,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;5.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.19e-07,58;CL:0002178,5.66e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.73e-16;13!UBERON:0004161;6.59e-10;11!UBERON:0003104;9.36e-10;31!UBERON:0006595;2.70e-08;86!UBERON:0001041;3.33e-08;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.15e-10;2!DOID:4929;6.33e-10;2!DOID:299;5.90e-08;25!DOID:3119;7.60e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.15e-10,2;DOID:4929,6.48e-10,2;DOID:305,4.20e-08,106;DOID:299,5.97e-08,25;DOID:3119,7.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-45!57;UBERON:0005068!1.08e-45!57;UBERON:0006241!1.08e-45!57;UBERON:0007135!1.08e-45!57;UBERON:0007023!6.35e-45!115;UBERON:0000955!8.06e-37!69;UBERON:0006238!8.06e-37!69;UBERON:0002616!9.67e-37!59;UBERON:0001017!3.04e-36!82;UBERON:0005743!1.45e-35!86;UBERON:0002780!2.25e-31!41;UBERON:0001890!2.25e-31!41;UBERON:0006240!2.25e-31!41;UBERON:0000073!5.95e-31!94;UBERON:0001016!5.95e-31!94;UBERON:0003080!1.97e-30!42;UBERON:0003075!3.08e-29!86;UBERON:0007284!3.08e-29!86;UBERON:0002020!4.66e-29!34;UBERON:0003528!4.66e-29!34;UBERON:0001893!1.59e-28!34;UBERON:0002346!2.19e-27!90;UBERON:0002791!3.63e-27!33;UBERON:0001869!5.92e-26!32;UBERON:0002619!2.64e-22!22;UBERON:0001950!5.49e-22!20;UBERON:0000153!2.70e-21!129;UBERON:0007811!2.70e-21!129;UBERON:0000033!9.39e-21!123;UBERON:0003056!8.89e-20!61;UBERON:0000956!3.91e-19!25;UBERON:0000203!3.91e-19!25;UBERON:0000025!1.39e-16!194;UBERON:0003076!2.49e-16!15;UBERON:0003057!2.49e-16!15;UBERON:0000481!5.00e-14!347;UBERON:0005409!1.56e-13!35;UBERON:0004121!3.09e-13!169;UBERON:0000924!1.20e-12!173;UBERON:0006601!1.20e-12!173;UBERON:0004111!1.64e-12!241;UBERON:0004733!7.75e-12!12;UBERON:0002028!7.75e-12!12;UBERON:0007277!7.75e-12!12;UBERON:0002308!1.07e-11!9;UBERON:0000125!1.07e-11!9;UBERON:0002298!1.94e-11!8;UBERON:0000062!3.78e-11!511;UBERON:0000200!8.84e-11!6;UBERON:0004732!8.96e-11!13;UBERON:0000475!1.05e-10!365;UBERON:0000160!1.60e-10!27;UBERON:0000064!4.21e-10!219;UBERON:0000477!2.29e-09!286;UBERON:0000059!3.76e-09!11;UBERON:0002420!9.47e-09!9;UBERON:0007245!9.47e-09!9;UBERON:0010009!9.47e-09!9;UBERON:0010011!9.47e-09!9;UBERON:0000454!9.47e-09!9;UBERON:0004921!1.97e-08!129;UBERON:0004185!1.97e-08!129;UBERON:0001871!2.21e-08!7;UBERON:0009663!2.28e-08!7;UBERON:0000483!3.76e-08!309;UBERON:0000119!6.18e-08!312;UBERON:0002294!8.57e-08!7;UBERON:0001173!8.57e-08!7;UBERON:0004912!8.57e-08!7;UBERON:0004907!2.44e-07!5;UBERON:0002680!2.71e-07!9;UBERON:0001895!2.71e-07!9;UBERON:0010092!2.71e-07!9;UBERON:0000922!2.81e-07!612;UBERON:0000369!5.22e-07!4;UBERON:0002435!5.22e-07!4;UBERON:0000204!5.22e-07!4;UBERON:0010082!5.22e-07!4;UBERON:0001007!7.22e-07!155;UBERON:0001555!7.22e-07!155;UBERON:0007026!7.22e-07!155;UBERON:0000988!7.88e-07!3;UBERON:0001896!9.41e-07!3;UBERON:0005290!9.41e-07!3;UBERON:0010096!9.41e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.04e-41;22!UBERON:0000160;8.29e-34;17!UBERON:0004921;6.51e-24;33!UBERON:0000059;3.81e-19;11!UBERON:0002298;1.00e-16;6!UBERON:0002294;1.19e-15;7!UBERON:0001173;1.19e-15;7!UBERON:0002108;3.60e-15;4!UBERON:0004907;2.52e-14;5!UBERON:0002423;9.09e-13;25!UBERON:0000988;9.24e-13;3!UBERON:0001155;2.37e-12;9!UBERON:0004733;1.27e-11;12!UBERON:0002028;1.27e-11;12!UBERON:0002394;9.82e-11;4!UBERON:0003928;9.82e-11;4!UBERON:0000058;1.09e-10;10!UBERON:0004732;1.10e-10;13!UBERON:0001052;1.34e-10;4!UBERON:0001007;1.33e-09;81!UBERON:0002148;4.51e-09;2!UBERON:0006331;4.51e-09;2!UBERON:0009662;4.51e-09;2!UBERON:0000945;1.42e-08;5!UBERON:0010039;1.42e-08;5!UBERON:0001555;6.02e-08;54!UBERON:0002680;2.24e-07;9!UBERON:0001895;2.24e-07;9!UBERON:0002114;5.10e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.46e-40,25;UBERON:0000160,8.18e-34,17;UBERON:0011216,8.24e-21,223;UBERON:0000059,3.71e-19,11;UBERON:0004921,4.35e-19,118;UBERON:0001007,3.10e-17,145;UBERON:0001555,3.10e-17,145;UBERON:0007026,3.10e-17,145;UBERON:0002298,9.52e-17,6;UBERON:0002108,3.67e-15,4;UBERON:0004119,5.15e-15,160;UBERON:0000925,5.15e-15,160;UBERON:0006595,5.15e-15,160;UBERON:0004907,2.52e-14,5;UBERON:0000988,8.69e-13,3;UBERON:0009497,9.17e-13,25;UBERON:0000015,9.17e-13,25;UBERON:0002423,9.17e-13,25;UBERON:0006235,9.17e-13,25;UBERON:0004161,9.17e-13,25;UBERON:0001155,2.32e-12,9;UBERON:0003076,2.50e-12,15;UBERON:0003057,2.50e-12,15;UBERON:0009856,3.67e-12,26;UBERON:0002294,4.18e-12,9;UBERON:0001173,4.18e-12,9;UBERON:0004912,4.18e-12,9;UBERON:0004733,1.22e-11,12;UBERON:0002028,1.22e-11,12;UBERON:0007277,1.22e-11,12;UBERON:0009854,4.10e-11,23;UBERON:0004732,1.06e-10,13;UBERON:0001052,1.34e-10,4;UBERON:0007499,4.32e-10,25;UBERON:0007023,5.56e-10,114;UBERON:0003929,2.96e-09,54;UBERON:0002148,3.36e-09,2;UBERON:0006331,3.36e-09,2;UBERON:0009662,3.36e-09,2;UBERON:0008835,4.88e-09,22;UBERON:0003894,4.88e-09,22;UBERON:0000945,5.81e-09,8;UBERON:0010039,5.81e-09,8;UBERON:0001049,6.75e-08,56;UBERON:0005068,6.75e-08,56;UBERON:0006241,6.75e-08,56;UBERON:0007135,6.75e-08,56;UBERON:0005911,1.93e-07,82;UBERON:0002680,2.16e-07,9;UBERON:0001895,2.16e-07,9;UBERON:0010092,2.16e-07,9;UBERON:0002394,2.77e-07,6;UBERON:0003928,2.77e-07,6;UBERON:0000073,4.58e-07,53;UBERON:0002616,4.58e-07,53;UBERON:0000025,4.58e-07,192;UBERON:0002114,5.18e-07,2;UBERON:0001041,7.81e-07,87 | |||
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| ||
|short_description=p2@GPR35 | |||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p2@GPR35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR35_5end |
Coexpression cluster: | C2192_small_signet_gastric_adenocarcinoma_colon_bile_duodenum |
Association with transcript: | 0bp_to_ENST00000319838, ENST00000403859, ENST00000438013, uc010fzh.1, uc010fzi.1_5end |
EntrezGene: | GPR35 |
HGNC: | 4492 |
UniProt: | Q9HC97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.19e-07 | 58 |
epithelial cell of stomach | 5.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.15e-10 | 2 |
tubular adenocarcinoma | 6.48e-10 | 2 |
carcinoma | 4.20e-08 | 106 |
adenocarcinoma | 5.97e-08 | 25 |
gastrointestinal system cancer | 7.66e-08 | 14 |