FFCP PHASE1:Hg19::chr5:150591738..150591749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=27bp_to_ENST00000523466_5end | |association_with_transcript=27bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591738..150591749,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_14_at_GM2A_5end | |description=CAGE_peak_14_at_GM2A_5end | ||
|id=chr5:150591738..150591749,+ | |id=chr5:150591738..150591749,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.44e-37!172;CL:0000566!2.44e-37!172;CL:0000988!7.02e-36!182;CL:0000738!2.33e-33!140;CL:0002032!6.01e-33!165;CL:0000837!6.01e-33!165;CL:0002087!7.11e-27!119;CL:0002031!6.56e-24!124;CL:0002057!2.45e-19!42;CL:0000763!4.54e-19!112;CL:0000049!4.54e-19!112;CL:0000860!1.14e-17!45;CL:0000766!1.50e-15!76;CL:0002009!2.57e-14!65;CL:0002194!1.60e-13!63;CL:0000576!1.60e-13!63;CL:0000040!1.60e-13!63;CL:0000559!1.60e-13!63;CL:0000542!4.72e-13!53;CL:0000051!4.72e-13!53;CL:0000557!1.33e-12!71;CL:0000838!7.46e-12!52;CL:0000839!1.32e-11!70;CL:0000134!2.38e-11!358;CL:0002320!7.59e-11!365;CL:0000219!4.36e-09!390;CL:0000784!4.82e-09!3;CL:0000048!5.03e-07!430;CL:0000723!9.75e-07!436 | |ontology_enrichment_celltype=CL:0000037!2.44e-37!172;CL:0000566!2.44e-37!172;CL:0000988!7.02e-36!182;CL:0000738!2.33e-33!140;CL:0002032!6.01e-33!165;CL:0000837!6.01e-33!165;CL:0002087!7.11e-27!119;CL:0002031!6.56e-24!124;CL:0002057!2.45e-19!42;CL:0000763!4.54e-19!112;CL:0000049!4.54e-19!112;CL:0000860!1.14e-17!45;CL:0000766!1.50e-15!76;CL:0002009!2.57e-14!65;CL:0002194!1.60e-13!63;CL:0000576!1.60e-13!63;CL:0000040!1.60e-13!63;CL:0000559!1.60e-13!63;CL:0000542!4.72e-13!53;CL:0000051!4.72e-13!53;CL:0000557!1.33e-12!71;CL:0000838!7.46e-12!52;CL:0000839!1.32e-11!70;CL:0000134!2.38e-11!358;CL:0002320!7.59e-11!365;CL:0000219!4.36e-09!390;CL:0000784!4.82e-09!3;CL:0000048!5.03e-07!430;CL:0000723!9.75e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.19e-35;3!CL:0000860;1.71e-11;33!CL:0002057;1.71e-11;33!CL:0000451;4.43e-10;10!CL:0000473;6.43e-08;39!CL:0000234;6.43e-08;39!CL:0000771;2.28e-07;2!CL:0000094;7.65e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.85e-35,3;CL:0000738,2.71e-17,136;CL:0000037,1.18e-13,168;CL:0000988,7.26e-13,177;CL:0000766,7.42e-12,72;CL:0000451,4.29e-10,10;CL:0000860,1.35e-09,42;CL:0002057,1.35e-09,42;CL:0002194,7.37e-09,59;CL:0000576,7.37e-09,59;CL:0000040,7.37e-09,59;CL:0000559,7.37e-09,59;CL:0002032,9.23e-09,161;CL:0000837,9.23e-09,161;CL:0002087,9.34e-09,115;CL:0002009,1.49e-08,61;CL:0000473,2.37e-08,48;CL:0000234,2.37e-08,48;CL:0002031,2.43e-08,120;CL:0000839,7.24e-08,66;CL:0000557,9.65e-08,67;CL:0000763,1.40e-07,108;CL:0000049,1.40e-07,108;CL:0000771,2.28e-07,2;CL:0000094,7.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!9.92e-14!51;DOID:0060083!9.92e-14!51;DOID:1240!4.23e-09!39;DOID:0060058!7.52e-08!10 | |ontology_enrichment_disease=DOID:2531!9.92e-14!51;DOID:0060083!9.92e-14!51;DOID:1240!4.23e-09!39;DOID:0060058!7.52e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.14e-11!375;UBERON:0002371!1.58e-10!80;UBERON:0002390!9.34e-10!102;UBERON:0003061!9.34e-10!102;UBERON:0001474!2.14e-09!86;UBERON:0002193!2.56e-08!112;UBERON:0002405!3.21e-07!115;UBERON:0004765!3.46e-07!101;UBERON:0001434!3.46e-07!101 | |ontology_enrichment_uberon=UBERON:0002384!9.14e-11!375;UBERON:0002371!1.58e-10!80;UBERON:0002390!9.34e-10!102;UBERON:0003061!9.34e-10!102;UBERON:0001474!2.14e-09!86;UBERON:0002193!2.56e-08!112;UBERON:0002405!3.21e-07!115;UBERON:0004765!3.46e-07!101;UBERON:0001434!3.46e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.52e-25;2!UBERON:0005058;7.52e-25;2!UBERON:0009113;7.52e-25;2!UBERON:0004177;1.57e-10;5!UBERON:0005057;1.57e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.07e-13,4;UBERON:0005058,6.07e-13,4;UBERON:0009113,6.07e-13,4;UBERON:0003295,6.07e-13,4;UBERON:0005562,6.07e-13,4;UBERON:0002405,5.59e-09,93;UBERON:0003351,6.26e-09,6;UBERON:0002390,1.81e-08,98;UBERON:0003061,1.81e-08,98;UBERON:0004177,8.94e-08,7;UBERON:0005057,8.94e-08,7;UBERON:0002193,1.37e-07,108;UBERON:0002371,9.24e-07,76 | |||
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| ||
|short_description=p14@GM2A | |short_description=p14@GM2A | ||
}} | }} |
Latest revision as of 08:17, 16 September 2015
Short description: | p14@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GM2A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 27bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.85e-35 | 3 |
leukocyte | 2.71e-17 | 136 |
hematopoietic stem cell | 1.18e-13 | 168 |
hematopoietic cell | 7.26e-13 | 177 |
myeloid leukocyte | 7.42e-12 | 72 |
dendritic cell | 4.29e-10 | 10 |
classical monocyte | 1.35e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-09 | 42 |
monopoietic cell | 7.37e-09 | 59 |
monocyte | 7.37e-09 | 59 |
monoblast | 7.37e-09 | 59 |
promonocyte | 7.37e-09 | 59 |
hematopoietic oligopotent progenitor cell | 9.23e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.23e-09 | 161 |
nongranular leukocyte | 9.34e-09 | 115 |
macrophage dendritic cell progenitor | 1.49e-08 | 61 |
defensive cell | 2.37e-08 | 48 |
phagocyte | 2.37e-08 | 48 |
hematopoietic lineage restricted progenitor cell | 2.43e-08 | 120 |
myeloid lineage restricted progenitor cell | 7.24e-08 | 66 |
granulocyte monocyte progenitor cell | 9.65e-08 | 67 |
myeloid cell | 1.40e-07 | 108 |
common myeloid progenitor | 1.40e-07 | 108 |
eosinophil | 2.28e-07 | 2 |
granulocyte | 7.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.07e-13 | 4 |
hemolymphoid system gland | 6.07e-13 | 4 |
thymic region | 6.07e-13 | 4 |
pharyngeal gland | 6.07e-13 | 4 |
thymus primordium | 6.07e-13 | 4 |
immune system | 5.59e-09 | 93 |
pharyngeal epithelium | 6.26e-09 | 6 |
hematopoietic system | 1.81e-08 | 98 |
blood island | 1.81e-08 | 98 |
hemopoietic organ | 8.94e-08 | 7 |
immune organ | 8.94e-08 | 7 |
hemolymphoid system | 1.37e-07 | 108 |
bone marrow | 9.24e-07 | 76 |