FFCP PHASE1:Hg19::chr20:43280296..43280307,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100 | |EntrezGene=100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=186 | |HGNC=186 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000545776_5end | |association_with_transcript=0bp_to_ENST00000545776_5end | ||
|cluster_id=chr20:43280296..43280307,- | |||
|description=CAGE_peak_3_at_ADA_5end | |description=CAGE_peak_3_at_ADA_5end | ||
|id=chr20:43280296..43280307,- | |id=chr20:43280296..43280307,- | ||
|ontology_enrichment_celltype=CL:0000860!4.76e-18!45;CL:0002057!5.75e-18!42;CL:0002194!1.39e-14!63;CL:0000576!1.39e-14!63;CL:0000040!1.39e-14!63;CL:0000559!1.39e-14!63;CL:0002009!2.35e-13!65;CL:0000557!3.42e-11!71;CL:0000839!1.08e-10!70;CL:0000766!5.87e-10!76;CL:0002087!2.25e-09!119;CL:0000988!1.29e-07!182;CL:0000763!2.32e-07!112;CL:0000049!2.32e-07!112;CL:0002031!2.98e-07!124;CL:0000037!4.99e-07!172;CL:0000566!4.99e-07!172;CL:0000012!5.83e-07!682;CL:0000738!9.81e-07!140 | |ontology_enrichment_celltype=CL:0000860!4.76e-18!45;CL:0002057!5.75e-18!42;CL:0002194!1.39e-14!63;CL:0000576!1.39e-14!63;CL:0000040!1.39e-14!63;CL:0000559!1.39e-14!63;CL:0002009!2.35e-13!65;CL:0000557!3.42e-11!71;CL:0000839!1.08e-10!70;CL:0000766!5.87e-10!76;CL:0002087!2.25e-09!119;CL:0000988!1.29e-07!182;CL:0000763!2.32e-07!112;CL:0000049!2.32e-07!112;CL:0002031!2.98e-07!124;CL:0000037!4.99e-07!172;CL:0000566!4.99e-07!172;CL:0000012!5.83e-07!682;CL:0000738!9.81e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.67e-25;33!CL:0002057;3.67e-25;33!CL:0000473;2.83e-23;39!CL:0000234;2.83e-23;39!CL:0000576;4.15e-22;48!CL:0000766;6.22e-15;69!CL:0000763;5.81e-09;100!CL:0002087;9.93e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.07e-40,48;CL:0000234,4.07e-40,48;CL:0000860,8.89e-37,42;CL:0002057,8.89e-37,42;CL:0002194,1.67e-35,59;CL:0000576,1.67e-35,59;CL:0000040,1.67e-35,59;CL:0000559,1.67e-35,59;CL:0002009,6.37e-34,61;CL:0000557,9.67e-32,67;CL:0000839,2.15e-30,66;CL:0000766,8.19e-27,72;CL:0000763,7.12e-22,108;CL:0000049,7.12e-22,108;CL:0002087,1.27e-21,115;CL:0000988,4.44e-21,177;CL:0002031,4.12e-20,120;CL:0000037,5.78e-20,168;CL:0000738,3.89e-19,136;CL:0002032,1.59e-17,161;CL:0000837,1.59e-17,161;CL:0002393,2.03e-10,9;CL:0002397,2.03e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-26;42!CL:0000049;2.38e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!8.87e-11!86;UBERON:0002371!1.17e-10!80;UBERON:0004765!1.39e-10!101;UBERON:0001434!1.39e-10!101;UBERON:0002390!4.77e-08!102;UBERON:0003061!4.77e-08!102;UBERON:0002193!5.10e-08!112;UBERON:0002405!2.25e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-29,76;UBERON:0002405,7.38e-29,93;UBERON:0004765,9.72e-27,90;UBERON:0001474,1.92e-26,82;UBERON:0002390,5.28e-24,98;UBERON:0003061,5.28e-24,98;UBERON:0002193,8.49e-23,108;UBERON:0001434,1.17e-22,100;UBERON:0003081,9.93e-10,203;UBERON:0002204,5.12e-09,167;UBERON:0002384,9.44e-07,371 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0,0.263766978228454,1.11389717664042,0.994192127183747,0,1.20538905604795,0,0.975865597581014,1.47745269692145,0.204000691244253,0.313454721478088,1.14494394852423,1.23186982565596,0.376627918784408,0.764134057479513,0.738905305049512,0.236132343941038,0.393364276848904,0,0.928896739896456,1.83884244895785,0.30120591877825,0.739508020333575,0.619737604642413,0.284338464974843,3.22960483268332,1.10799081706375,3.40925560699241,1.95309783644267,3.80656306207871,0,1.54545340580512,2.76256653681173,3.02300754951048,5.57943340731977,2.78914844286822,5.75635043230556,4.95530193432166,0.28769239232215,0.512321413058201,1.89185783910868,3.44745680736619,3.22742341791913,9.47985406160392,2.44715041405386,1.09162460023138,4.71919317334678,5.81559395504715,1.92557416245656,6.39337125799041,1.31940520074686,1.59570926097305,1.27867425159808,9.28669563611469,5.6738522469114,16.8162007228805,0.502497330513487,0,0.65156653411535,9.6863920421339,5.89244217580104,10.1267963981083,1.05627643155971,0.212604299965044,1.67726916406701,0,0.150176892841506,0.16072558669708,2.56511469367124,2.38700012638908,2.73996230646951,0,0,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,5.04457706683382,1.58030450865046,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0.557052284425868,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0.493313713811028,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,1.51255707462509,0.886917589850256,0.527008714158756,0.392937226493138,0.728590576585084,0,0,0.174129737299267,0,1.90792499444274,1.71598473234038,2.22874500797739,0.39752481473341,0,0.694281003215189,0,0.419499436209906,1.6507082516404,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0,0.976248230192678,0.367663080345869,5.67099363517232,0.0892997282840798,0,0.337834441449967,0,1.89853131913626,0.732806975721629,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,2.88087962239999,0.234321431833797,0,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.567160915800105,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,1.03056216018252,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.368199594569197,0.484938170456436,0,0.403008392910561,0.169560592310488,0.966304265816484,0.272746120590835,0.860413786167011,0.487894824518382,0.662648841607426,1.39432731443422,1.24393266018445,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.330881918197182,0.871517776369625,0.71181185733329,0.404493924480493,0.392442930250692,1.53898862778556,0,0,0.8231480226628,0,0,0,0,19.4243763742446,0,0.686271241194102,0.329250856225877,2.24803506515239,0,0.0925884451585296,0,0,0,4.28942498407784,0,1.29929802984966,1.85194205030644,0,0,0,1.23108503043699,0,0.594524649154913,0.93733833986777,0.503946384596579,0.992425680696705,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0.07333828582095,0.387815147273333,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,1.08524321078289,0.823240336780769,0.977208552881205,0,0,0,0.871533458600294,0.299918973546171,2.43247561282381,4.01805673145701,6.32501818449095,0.718874566474748,0,0,0.289562613335158,0,0,0.672510863961164,0.394061520403854,1.07813787429759,0.898401253958239,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,1.2269149171914,0.500170521059677,1.35632511849868,0.207970861530807,0.535286966391485,0,0,0.601892199455438,0,1.03473071292505,0,0.553107505625109,0.173767228936166,13.3144787074664,4.11772108573027,0.206768026122887,0,0.426910231213777,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,1.48418066444991,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0.846016147141356,1.00253235151642,0,0.114814448164607,0,0.131124414959424,0,0.385076685522074,0.784349769176855,0,0.527758144464379,0,1.02056223165909,0.431831832204279,3.08454505380579,0.812839312631559,2.00675909541941,0.254876273045038,0,0.671624264166535,0,0,1.28225062558195,0.656029291399411,0,0,0.27470839445503,0.330037999682352,1.14853107599234,0.650060246036521,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.859361958946189,0.290033387828457,0.426133137080504,0.0890320356467374,0.495854746082934,0,0.510450849978337,0,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.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| ||
|short_description=p3@ADA | |short_description=p3@ADA | ||
}} | }} |
Latest revision as of 08:27, 16 September 2015
Short description: | p3@ADA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545776_5end |
EntrezGene: | ADA |
HGNC: | 186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.07e-40 | 48 |
phagocyte | 4.07e-40 | 48 |
classical monocyte | 8.89e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.89e-37 | 42 |
monopoietic cell | 1.67e-35 | 59 |
monocyte | 1.67e-35 | 59 |
monoblast | 1.67e-35 | 59 |
promonocyte | 1.67e-35 | 59 |
macrophage dendritic cell progenitor | 6.37e-34 | 61 |
granulocyte monocyte progenitor cell | 9.67e-32 | 67 |
myeloid lineage restricted progenitor cell | 2.15e-30 | 66 |
myeloid leukocyte | 8.19e-27 | 72 |
myeloid cell | 7.12e-22 | 108 |
common myeloid progenitor | 7.12e-22 | 108 |
nongranular leukocyte | 1.27e-21 | 115 |
hematopoietic cell | 4.44e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 4.12e-20 | 120 |
hematopoietic stem cell | 5.78e-20 | 168 |
leukocyte | 3.89e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.59e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-17 | 161 |
intermediate monocyte | 2.03e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.03e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-29 | 76 |
immune system | 7.38e-29 | 93 |
skeletal element | 9.72e-27 | 90 |
bone element | 1.92e-26 | 82 |
hematopoietic system | 5.28e-24 | 98 |
blood island | 5.28e-24 | 98 |
hemolymphoid system | 8.49e-23 | 108 |
skeletal system | 1.17e-22 | 100 |
lateral plate mesoderm | 9.93e-10 | 203 |
musculoskeletal system | 5.12e-09 | 167 |
connective tissue | 9.44e-07 | 371 |