FFCP PHASE1:Hg19::chr12:110906005..110906021,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51184 | |EntrezGene=51184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30186 | |HGNC=30186 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_uc001tqr.2_5end | |association_with_transcript=42bp_to_uc001tqr.2_5end | ||
|cluster_id=chr12:110906005..110906021,- | |||
|description=CAGE_peak_2_at_GPN3_5end | |description=CAGE_peak_2_at_GPN3_5end | ||
|id=chr12:110906005..110906021,- | |id=chr12:110906005..110906021,- | ||
|ontology_enrichment_celltype=CL:0000763!1.79e-11!112;CL:0000049!1.79e-11!112;CL:0002032!5.87e-11!165;CL:0000837!5.87e-11!165;CL:0000037!7.83e-11!172;CL:0000566!7.83e-11!172;CL:0000988!7.24e-10!182;CL:0000012!1.28e-07!682;CL:0000548!2.55e-07!679;CL:0000004!2.55e-07!679;CL:0000255!2.55e-07!679;CL:0000063!6.37e-07!578 | |ontology_enrichment_celltype=CL:0000763!1.79e-11!112;CL:0000049!1.79e-11!112;CL:0002032!5.87e-11!165;CL:0000837!5.87e-11!165;CL:0000037!7.83e-11!172;CL:0000566!7.83e-11!172;CL:0000988!7.24e-10!182;CL:0000012!1.28e-07!682;CL:0000548!2.55e-07!679;CL:0000004!2.55e-07!679;CL:0000255!2.55e-07!679;CL:0000063!6.37e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.17e-10,108;CL:0000049,1.17e-10,108;CL:0002032,1.98e-10,161;CL:0000837,1.98e-10,161;CL:0000988,3.11e-10,177;CL:0000037,4.29e-10,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.11e-21!51;DOID:0060083!2.11e-21!51;DOID:14566!3.29e-19!239;DOID:162!6.58e-19!235;DOID:1240!4.89e-18!39;DOID:8692!5.65e-16!31;DOID:0050686!6.91e-15!137;DOID:305!6.68e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.91e-19;31!DOID:1240;4.83e-18;39!DOID:2531;7.72e-15;51!DOID:0060083;7.72e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.47e-26,51;DOID:0060083,1.47e-26,51;DOID:1240,2.53e-23,39;DOID:8692,8.13e-21,31;DOID:14566,2.02e-17,239;DOID:162,2.79e-17,235;DOID:0050686,1.20e-15,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.68e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-10;9!UBERON:0001557;2.04e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.51e-10,9 | |||
|phase1_expression=0.908391896352783,1.49870366723688,1.12763523276777,0,2.68176656656373,0,2.53299878168311,0.631719873426831,0,0.737201809504527,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0.408001382488506,0,0.286235987131057,0.136874425072884,0.376627918784408,0.840547463227464,1.14940825229924,1.10195093839151,0.393364276848904,0.767658796194425,0.928896739896456,3.67768489791571,0.90361775633475,0.369754010166788,4.33816323249689,2.55904618477359,1.46800219667424,0,0,0.651032612147555,1.34349284543955,1.94336199611388,0.77272670290256,0.581592955118259,0,0,0.232429036905685,0,0.929119112685311,1.1507695692886,0.768482119587302,0.945928919554341,0.689491361473237,0,0,0.188242339542605,0.818718450173537,1.79778787556068,0.612167784741805,0,0.639337125799041,0.989553900560148,0.598390972864896,0.852449501065388,0.580418477257168,0.56738522469114,0,1.25624332628372,1.0429658368404,0.217188844705117,0,0.736555271975129,1.26584954976354,3.80259515361495,4.67729459923096,1.46761051855863,2.02191536063691,1.35159203557356,0.48217676009124,1.71007646244749,2.58591680358817,1.64397738388171,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,1.68152568894461,2.63384084775077,0.590129310341499,1.17903228824749,1.43921049299656,0.501559486172034,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,1.15921234294021,0.296573126324121,0,0,0.339928028092699,0,0.68725489096526,0.506039384039006,0,0,0,0.301150238155546,0.639933055772092,1.24930726552346,0.473554504088034,0,0.403213486449465,1.33720097891754,0.289648807765598,0,2.01210257911091,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0,0.283604451492204,0.665188192387692,0.351339142772504,0.72038491523742,0,0.370784442784429,0.97364218096405,0.696518949197069,0.930705723632056,0.715471872916026,0,0.74291500265913,0.79504962946682,0,0,0.56530794192401,0,0.825354125820202,1.04497483268405,0.258416759169329,0,1.33888245105868,1.61131726843659,3.04108842287405,0.24406205754817,0.735326160691737,0,0.714397826272638,0.898117490504679,0.337834441449967,0,0,0.732806975721629,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.817309515567294,0.605429710579726,0.576175924479999,0,0.312160076830321,1.1409436430889,0.298897361103602,0.822041490506354,0.485618833104395,0.98315564691574,0.816616685019573,0.491337269247072,0.103325781175765,0,0.989067717114227,0,0,0.673344455816265,0.250237039743928,0.831192346452549,0,0.612975591598039,0.600952235626387,1.70148274740032,0.538168907066586,0,0.847727604638247,0.600182192168805,0.721367704669072,0.257640540045629,0.18611685633159,0.506328996723799,0.779496041289589,0.757301322732344,0.460249493211497,0.323292113637624,0,1.41052937518696,1.3564847384839,2.12586938479627,0.545492241181669,1.72082757233402,2.07355300420312,2.12047629314376,3.02104251460748,1.7622379352613,4.28945446488568,6.20461510428911,0,0,0,0.928735856063958,0,6.38856720215157,4.38320194203064,5.06123162755312,6.06616850028167,5.22910665821775,4.74541238222193,5.79774625088707,7.2601942096378,6.15595451114225,1.4763109092493,1.40241773803446,0,0,0,2.94848165003288,2.36315962672562,2.20731549707325,0.983907508344908,0.857839051492628,1.20725313949488,1.1240175325762,0.804231779293047,0.462942225792648,0,0,2.88662684050547,0.231860809950154,0.117408694235822,0.433099343283221,0.925971025153221,0,1.58040879591855,1.71697232418975,3.20082107913617,5.6161023633417,2.52672975890838,2.81201501960331,1.6798212819886,2.26840155587818,1.97028749946266,3.19697332365358,0,0.492663237895943,1.40877494421162,0.829312462163088,0.288239906833923,0.6312121671319,1.0159663086747,0.381988425558278,1.17217447210047,1.71072446022705,0.616964956219941,2.10240140490742,0.285826432630578,0.224262168690721,0.43596006883328,1.10007428731425,0.517086863031111,0,0.845302752556,1.32969058292435,0,0,0,0.266422179016099,0.142977993658148,0,0,1.30294473717494,0.355391948742546,0.791951872933429,0.602878754119172,0,0.299918973546171,0,3.01354254859276,2.10833939483032,0.479249710983165,0,0,1.01346914667305,0.410952645100767,0.716243852959582,0.672510863961164,0.985153801009636,0.862510299438069,1.15508732651774,0.508189248444927,2.60279707715243,1.54657762555539,0.335032530668698,1.27587750330633,1.49801404789436,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0.347534457872331,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0.606255142892519,0,0.30239029332968,1.24053903909388,0.61384789315225,0.561320188866147,1.53766979106841,0.511707249066704,1.44768529029247,0,1.3878872442239,0.887808626565635,1.47828880824856,1.03850885836724,1.16210378459959,0.8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|short_description=p2@GPN3 | |short_description=p2@GPN3 | ||
}} | }} |
Latest revision as of 08:32, 16 September 2015
Short description: | p2@GPN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_uc001tqr.2_5end |
EntrezGene: | GPN3 |
HGNC: | 30186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.17e-10 | 108 |
common myeloid progenitor | 1.17e-10 | 108 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 161 |
hematopoietic cell | 3.11e-10 | 177 |
hematopoietic stem cell | 4.29e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.51e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.47e-26 | 51 |
immune system cancer | 1.47e-26 | 51 |
leukemia | 2.53e-23 | 39 |
myeloid leukemia | 8.13e-21 | 31 |
disease of cellular proliferation | 2.02e-17 | 239 |
cancer | 2.79e-17 | 235 |
organ system cancer | 1.20e-15 | 137 |