FFCP PHASE1:Hg19::chr11:12263827..12263838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9645 | |EntrezGene=9645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |HGNC=24693 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000534563_5end | |association_with_transcript=-29bp_to_ENST00000534563_5end | ||
|cluster_id=chr11:12263827..12263838,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_29_at_MICAL2_5end | |description=CAGE_peak_29_at_MICAL2_5end | ||
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|ontology_enrichment_celltype=CL:0000840!4.96e-47!5;CL:0001029!4.96e-47!5;CL:0000451!1.10e-44!10;CL:0000990!3.05e-31!8;CL:0000784!9.99e-24!3;CL:0001014!3.04e-17!2;CL:0001016!3.04e-17!2;CL:0002619!3.42e-11!3;CL:0002009!2.85e-10!65;CL:0000557!2.80e-09!71;CL:0000453!2.04e-07!5;CL:0002322!7.63e-07!5 | |ontology_enrichment_celltype=CL:0000840!4.96e-47!5;CL:0001029!4.96e-47!5;CL:0000451!1.10e-44!10;CL:0000990!3.05e-31!8;CL:0000784!9.99e-24!3;CL:0001014!3.04e-17!2;CL:0001016!3.04e-17!2;CL:0002619!3.42e-11!3;CL:0002009!2.85e-10!65;CL:0000557!2.80e-09!71;CL:0000453!2.04e-07!5;CL:0002322!7.63e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;5.12e-66;5!CL:0001014;1.14e-50;2!CL:0001016;1.14e-50;2!CL:0000990;2.84e-44;8!CL:0000451;2.35e-36;10!CL:0000453;5.44e-21;5 | |ontology_enrichment_celltype_v019=CL:0000840;5.12e-66;5!CL:0001014;1.14e-50;2!CL:0001016;1.14e-50;2!CL:0000990;2.84e-44;8!CL:0000451;2.35e-36;10!CL:0000453;5.44e-21;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.06e-66,5;CL:0001029,6.06e-66,5;CL:0001014,1.14e-50,2;CL:0001016,1.14e-50,2;CL:0000990,3.18e-44,8;CL:0000451,2.58e-36,10;CL:0000453,5.44e-21,5;CL:0002009,3.06e-10,61;CL:0000557,2.35e-09,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!1.74e-09!1;DOID:1357!1.74e-09!1 | |ontology_enrichment_disease=DOID:0050619!1.74e-09!1;DOID:1357!1.74e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.78e-26;1!DOID:1357;2.78e-26;1 | |ontology_enrichment_disease_v019=DOID:0050619;2.78e-26;1!DOID:1357;2.78e-26;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.78e-26,1;DOID:1357,2.78e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.74e-09!1;UBERON:0001825!1.74e-09!1;UBERON:0002902!1.07e-08!1;UBERON:0009899!1.07e-08!1;UBERON:0002371!4.55e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002390!2.74e-07!102;UBERON:0003061!2.74e-07!102 | |ontology_enrichment_uberon=UBERON:0001764!1.74e-09!1;UBERON:0001825!1.74e-09!1;UBERON:0002902!1.07e-08!1;UBERON:0009899!1.07e-08!1;UBERON:0002371!4.55e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002390!2.74e-07!102;UBERON:0003061!2.74e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.78e-26;1!UBERON:0001825;2.78e-26;1 | |ontology_enrichment_uberon_v019=UBERON:0001764;2.78e-26;1!UBERON:0001825;2.78e-26;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.78e-26,1;UBERON:0001825,2.78e-26,1;UBERON:0002371,2.78e-08,76;UBERON:0001474,1.07e-07,82;UBERON:0004765,4.96e-07,90;UBERON:0002405,8.23e-07,93 | |||
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|short_description=p29@MICAL2 | |short_description=p29@MICAL2 | ||
}} | }} |
Latest revision as of 08:37, 16 September 2015
Short description: | p29@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_MICAL2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -29bp_to_ENST00000534563_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.06e-66 | 5 |
common dendritic progenitor | 6.06e-66 | 5 |
CD1a-positive Langerhans cell | 1.14e-50 | 2 |
immature CD1a-positive Langerhans cell | 1.14e-50 | 2 |
conventional dendritic cell | 3.18e-44 | 8 |
dendritic cell | 2.58e-36 | 10 |
Langerhans cell | 5.44e-21 | 5 |
macrophage dendritic cell progenitor | 3.06e-10 | 61 |
granulocyte monocyte progenitor cell | 2.35e-09 | 67 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.78e-26 | 1 |
paranasal sinus | 2.78e-26 | 1 |
bone marrow | 2.78e-08 | 76 |
bone element | 1.07e-07 | 82 |
skeletal element | 4.96e-07 | 90 |
immune system | 8.23e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.78e-26 | 1 |
maxillary sinus cancer | 2.78e-26 | 1 |