FFCP PHASE1:Hg19::chr13:102104980..102105050,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:102104980..102105050,+ to FFCP PHASE1:Hg19::chr13:102104980..102105050,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTP1 | |UniProt=B3KTP1 | ||
|association_with_transcript=0bp_to_ENST00000539955,ENST00000545560_5end | |||
|cluster_id=chr13:102104980..102105050,+ | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_1_at_ITGBL1_5end | |||
|id=chr13:102104980..102105050,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-40!180;CL:0000057!1.21e-28!75;CL:0000680!2.31e-14!57;CL:0000056!2.31e-14!57;CL:0000355!2.31e-14!57;CL:0000187!9.19e-13!54;CL:0002620!1.23e-12!23;CL:0000183!2.60e-12!59;CL:0000192!2.00e-11!42;CL:0000514!2.00e-11!42;CL:0000222!2.17e-11!119;CL:0000393!4.59e-10!60;CL:0000211!4.59e-10!60;CL:0000359!1.82e-09!32;CL:0002334!3.90e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.81e-13;23!CL:0000057;3.56e-12;73!CL:0000359;7.55e-10;32!CL:0000192;1.13e-09;43!CL:0002320;3.09e-09;188!CL:0002334;1.27e-08;12!CL:0000134;3.09e-08;55!CL:0000187;3.60e-08;55!CL:0000048;7.16e-07;58!CL:0000723;9.06e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-31,76;CL:0000680,1.38e-15,58;CL:0000056,1.38e-15,58;CL:0000355,1.38e-15,58;CL:0000187,7.32e-14,55;CL:0002620,1.81e-13,23;CL:0000192,2.02e-12,43;CL:0000514,2.02e-12,43;CL:0000222,6.80e-11,121;CL:0000393,1.23e-10,61;CL:0000211,1.23e-10,61;CL:0000359,3.05e-10,32;CL:0000048,7.81e-09,427;CL:0002334,1.25e-08,12;CL:0000723,6.08e-08,433;CL:0000034,7.60e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.13e-09;43!CL:0000355;1.99e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.13e-21!365;UBERON:0000914!3.42e-21!83;UBERON:0002329!3.42e-21!83;UBERON:0003077!3.42e-21!83;UBERON:0003059!3.42e-21!83;UBERON:0007282!3.42e-21!83;UBERON:0009618!3.42e-21!83;UBERON:0007285!3.42e-21!83;UBERON:0004290!2.76e-17!70;UBERON:0003102!1.06e-15!95;UBERON:0000486!8.04e-15!82;UBERON:0001134!2.82e-14!61;UBERON:0002036!2.82e-14!61;UBERON:0003082!2.82e-14!61;UBERON:0002385!6.81e-14!63;UBERON:0001015!6.81e-14!63;UBERON:0000383!6.81e-14!63;UBERON:0002049!6.55e-13!79;UBERON:0007798!6.55e-13!79;UBERON:0002100!5.72e-12!216;UBERON:0004872!8.51e-12!84;UBERON:0004573!2.51e-11!33;UBERON:0004571!2.51e-11!33;UBERON:0005256!2.84e-11!143;UBERON:0001981!3.18e-11!60;UBERON:0007500!3.18e-11!60;UBERON:0004537!3.18e-11!60;UBERON:0006965!3.18e-11!60;UBERON:0001637!4.22e-11!42;UBERON:0003509!4.22e-11!42;UBERON:0004572!4.22e-11!42;UBERON:0000468!1.97e-10!659;UBERON:0000055!2.01e-10!69;UBERON:0000481!5.45e-10!347;UBERON:0002199!1.53e-09!45;UBERON:0002416!1.53e-09!45;UBERON:0001009!1.10e-08!113;UBERON:0004535!1.59e-08!110;UBERON:0000119!2.42e-08!312;UBERON:0003104!4.22e-08!238;UBERON:0009142!4.22e-08!238;UBERON:0002097!6.48e-08!40;UBERON:0000483!7.72e-08!309;UBERON:0000467!7.98e-08!625;UBERON:0000480!1.17e-07!626;UBERON:0000477!1.69e-07!286;UBERON:0000490!2.36e-07!138;UBERON:0000947!3.83e-07!21;UBERON:0010191!3.83e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.12e-11;33!UBERON:0004571;6.12e-11;33!UBERON:0002384;7.45e-10;198!UBERON:0001637;1.75e-09;42!UBERON:0003509;1.75e-09;42!UBERON:0004572;1.75e-09;42!UBERON:0000947;1.17e-07;21!UBERON:0010191;1.17e-07;21!UBERON:0002385;1.23e-07;31!UBERON:0001015;1.23e-07;31!UBERON:0000383;1.23e-07;31!UBERON:0002204;1.42e-07;70!UBERON:0002199;2.94e-07;46!UBERON:0002416;2.94e-07;46!UBERON:0001013;5.28e-07;14!UBERON:0002097;6.49e-07;41 | |||
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| ||
|short_description=p1@ITGBL1 | |||
}} | }} |
Latest revision as of 08:38, 16 September 2015
Short description: | p1@ITGBL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | 0bp_to_ENST00000539955, ENST00000545560_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B3KTP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-31 | 76 |
muscle precursor cell | 1.38e-15 | 58 |
myoblast | 1.38e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-15 | 58 |
muscle cell | 7.32e-14 | 55 |
skin fibroblast | 1.81e-13 | 23 |
smooth muscle cell | 2.02e-12 | 43 |
smooth muscle myoblast | 2.02e-12 | 43 |
mesodermal cell | 6.80e-11 | 121 |
electrically responsive cell | 1.23e-10 | 61 |
electrically active cell | 1.23e-10 | 61 |
vascular associated smooth muscle cell | 3.05e-10 | 32 |
multi fate stem cell | 7.81e-09 | 427 |
preadipocyte | 1.25e-08 | 12 |
somatic stem cell | 6.08e-08 | 433 |
stem cell | 7.60e-07 | 441 |