FFCP PHASE1:Hg19::chr13:102105139..102105150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTP1 | |UniProt=B3KTP1 | ||
|association_with_transcript=121bp_to_ENST00000545560_5end | |association_with_transcript=121bp_to_ENST00000545560_5end | ||
|cluster_id=chr13:102105139..102105150,+ | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_3_at_ITGBL1_5end | |description=CAGE_peak_3_at_ITGBL1_5end | ||
|id=chr13:102105139..102105150,+ | |id=chr13:102105139..102105150,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.56e-32!180;CL:0000057!7.14e-19!75;CL:0000680!2.59e-15!57;CL:0000056!2.59e-15!57;CL:0000355!2.59e-15!57;CL:0000192!1.09e-14!42;CL:0000514!1.09e-14!42;CL:0000187!2.39e-13!54;CL:0000183!3.41e-12!59;CL:0000359!1.24e-11!32;CL:0000222!3.74e-11!119;CL:0002620!1.17e-10!23;CL:0000393!1.61e-10!60;CL:0000211!1.61e-10!60;CL:0002334!9.02e-08!12 | |ontology_enrichment_celltype=CL:0000055!1.56e-32!180;CL:0000057!7.14e-19!75;CL:0000680!2.59e-15!57;CL:0000056!2.59e-15!57;CL:0000355!2.59e-15!57;CL:0000192!1.09e-14!42;CL:0000514!1.09e-14!42;CL:0000187!2.39e-13!54;CL:0000183!3.41e-12!59;CL:0000359!1.24e-11!32;CL:0000222!3.74e-11!119;CL:0002620!1.17e-10!23;CL:0000393!1.61e-10!60;CL:0000211!1.61e-10!60;CL:0002334!9.02e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.57e-12;23!CL:0000359;3.03e-10;32!CL:0002334;4.15e-09;12!CL:0000192;2.27e-08;43!CL:0002595;3.06e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.87e-22,76;CL:0002620,1.64e-12,23;CL:0000192,9.24e-11,43;CL:0000514,9.24e-11,43;CL:0000359,1.39e-10,32;CL:0000048,2.20e-10,427;CL:0000680,6.72e-10,58;CL:0000056,6.72e-10,58;CL:0000355,6.72e-10,58;CL:0000723,7.61e-10,433;CL:0002334,3.66e-09,12;CL:0000034,3.70e-09,441;CL:0000187,8.87e-08,55;CL:0002595,3.69e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;2.27e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.92e-15!83;UBERON:0002329!8.92e-15!83;UBERON:0003077!8.92e-15!83;UBERON:0003059!8.92e-15!83;UBERON:0007282!8.92e-15!83;UBERON:0009618!8.92e-15!83;UBERON:0007285!8.92e-15!83;UBERON:0001134!5.03e-14!61;UBERON:0002036!5.03e-14!61;UBERON:0003082!5.03e-14!61;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004290!3.67e-13!70;UBERON:0002385!4.83e-13!63;UBERON:0001015!4.83e-13!63;UBERON:0000383!4.83e-13!63;UBERON:0000475!5.93e-13!365;UBERON:0004573!2.43e-12!33;UBERON:0004571!2.43e-12!33;UBERON:0002049!1.69e-10!79;UBERON:0007798!1.69e-10!79;UBERON:0000486!1.74e-10!82;UBERON:0001981!3.00e-10!60;UBERON:0007500!3.00e-10!60;UBERON:0004537!3.00e-10!60;UBERON:0006965!3.00e-10!60;UBERON:0004872!3.48e-09!84;UBERON:0002100!6.41e-09!216;UBERON:0000055!1.16e-08!69;UBERON:0003102!1.21e-07!95;UBERON:0005256!6.84e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.93e-10;33!UBERON:0004571;1.93e-10;33!UBERON:0001637;8.65e-10;42!UBERON:0003509;8.65e-10;42!UBERON:0004572;8.65e-10;42!UBERON:0003688;1.20e-09;6!UBERON:0002358;1.20e-09;6!UBERON:0003684;1.20e-09;6!UBERON:0001178;1.20e-09;6!UBERON:0004457;8.95e-08;9!UBERON:0000042;8.95e-08;9!UBERON:0003834;3.06e-07;5!UBERON:0001533;3.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.98e-12,33;UBERON:0004571,3.98e-12,33;UBERON:0001637,4.17e-12,42;UBERON:0003509,4.17e-12,42;UBERON:0004572,4.17e-12,42;UBERON:0003688,1.23e-09,6;UBERON:0002358,1.23e-09,6;UBERON:0003684,1.23e-09,6;UBERON:0001178,1.23e-09,6;UBERON:0001134,9.37e-09,62;UBERON:0002036,9.37e-09,62;UBERON:0003082,9.37e-09,62;UBERON:0002385,3.04e-08,64;UBERON:0001015,3.04e-08,64;UBERON:0000383,3.04e-08,64;UBERON:0002199,8.26e-08,46;UBERON:0002416,8.26e-08,46;UBERON:0002097,1.69e-07,41;UBERON:0007524,1.73e-07,73;UBERON:0003102,2.20e-07,99;UBERON:0002329,2.51e-07,71;UBERON:0003059,2.51e-07,71;UBERON:0007282,2.51e-07,71;UBERON:0004290,2.51e-07,71;UBERON:0009618,2.51e-07,71;UBERON:0007500,2.76e-07,59;UBERON:0001981,2.76e-07,59;UBERON:0004537,2.76e-07,59;UBERON:0006965,2.76e-07,59;UBERON:0003834,3.69e-07,5;UBERON:0001533,3.69e-07,5;UBERON:0003077,4.01e-07,72;UBERON:0007285,4.01e-07,72 | |||
|phase1_expression=21.0746919953846,9.63452357509424,12.1220787522535,14.0102617694383,7.59833860526389,17.4467704820074,7.59899634504932,0.631719873426831,0,0,0,0,0,2.10402800032079,1.98838425436749,0,1.20538905604795,0.730310090387373,2.92759679274304,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,3.50936537445123,2.60723734129483,3.9764297352555,1.45990461090791,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0,1.13061588384802,2.09749718104953,0.275118041940067,1.04497483268405,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0,0,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,14.4121865991642,6.33152558322899,10.0630977418046,15.7760141411848,3.54668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.756787138224657,0,0.234321431833797,1.5608003841516,0,0.298897361103602,0.117434498643765,0.161872944368132,0,2.85815839756851,0.491337269247072,1.96318984233954,0,2.71993622206413,0,0,0.168336113954066,0.375355559615893,1.6623846929051,2.63386572528503,3.0648779579902,1.80285670687916,1.13432183160021,5.38168907066586,1.92201649936711,2.54318281391474,10.2030972668697,2.26715564324566,6.44101350114073,7.258557396932,15.5274225661965,6.04109431999431,2.52433774244115,2.30124746605748,1.93975268182574,11.005297368015,4.23158812556089,1.18692414617341,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0,3.52226082707465,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.626909658919938,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,1.98013371716565,10.3417372606222,0,0,3.72313363218819,2.08014873822732,0.257207374262142,0,0.266422179016099,0.57191197463259,1.08524321078289,0,0.977208552881205,1.06617584622764,0,0,0,0,0,0,0,4.55287225434007,1.14861935834114,2.85273810081437,10.7138166934009,11.3011977402711,7.34149949283572,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,1.08506009479894,14.7659311686873,7.85087550707512,10.4083593922397,11.2455758393005,9.93122129101472,6.82222512167955,2.0694614258501,5.97803038681893,2.39679919104214,0.781952530212746,0,0,0,0,0,0,1.66435439510497,0,20.5929480489585,27.009307298699,14.0330047216537,11.5325234330131,19.9565827136014,12.0640440857706,22.2627099667486,0,1.59805552781814,0.492762936082855,4.67328986265259,0.348631135379878,0,0,0,2.87036120411517,2.36718518408732,2.22911505431021,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0.27470839445503,0.577566499444116,0,0,1.6068392984416,0.193341436584244,0.462145851343933,0.460511024178389,0,0.214840489736547,0,0.426133137080504,0.623224249527161,0,0,0,0,1.39453664789186,37.4626692728462,6.2733354314454,0.616067160352178,1.59691809095107,0,2.03856641014312,4.57999637574372,2.232950216158,2.84741482246853,2.09693213316207,1.27948895655667,0,0.636406495851874,0.78494864019923,0.359744915166629,1.09814811894422,0.235624804691373,1.81964233415984,4.75530963519025,0.421258456238981,0.48763373908959,7.55511817856982,3.16950440270266,0.272999822815972,2.12108147930569,2.26016233240486,2.2054613741845,11.941901554342,6.13831239355268,1.15755106853338,1.31178950409327,0,0.30982349809975,0.281695602532241,0.286822704408103,1.17898849215745,0,0.709522128141196,2.32218398827431,0,1.13841952129715,1.74967360122491,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,1.90995587790152,3.8605408508243,2.76444631889309,0,0,0,0,0,3.58646378851925,0,0,0.613612095012929,0,9.95326680517784,0,0,0,0.197286811273867,0,12.2250689159101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,2.14834370736859,0,0,1.99396161812156,0.661983911750998,1.56966459203613,1.19472429772959,0,0.138674673013139,0,0.391969589657511,0,0,1.0319161948297,0,0,0,0.290967049465258,0,1.35588444468319,3.56309004081552,0,0.189932387867636,0,0,0,0.19980960958213,0,3.20702469264564,0,0,0.124252535565433,0,0.407712618220842,0.418411385249333,0.713987523454252,0,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,4.68389848605125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0.896436696664224,0,0.714695326373367,0,8.13659320495199,4.3439968140297,0,0,0,0,3.40776043570843,0,0,0,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| ||
|short_description=p3@ITGBL1 | |short_description=p3@ITGBL1 | ||
}} | }} |
Latest revision as of 08:43, 16 September 2015
Short description: | p3@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | 121bp_to_ENST00000545560_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B3KTP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.87e-22 | 76 |
skin fibroblast | 1.64e-12 | 23 |
smooth muscle cell | 9.24e-11 | 43 |
smooth muscle myoblast | 9.24e-11 | 43 |
vascular associated smooth muscle cell | 1.39e-10 | 32 |
multi fate stem cell | 2.20e-10 | 427 |
muscle precursor cell | 6.72e-10 | 58 |
myoblast | 6.72e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.72e-10 | 58 |
somatic stem cell | 7.61e-10 | 433 |
preadipocyte | 3.66e-09 | 12 |
stem cell | 3.70e-09 | 441 |
muscle cell | 8.87e-08 | 55 |
smooth muscle cell of the subclavian artery | 3.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 3.98e-12 | 33 |
systemic arterial system | 3.98e-12 | 33 |
artery | 4.17e-12 | 42 |
arterial blood vessel | 4.17e-12 | 42 |
arterial system | 4.17e-12 | 42 |
omentum | 1.23e-09 | 6 |
peritoneum | 1.23e-09 | 6 |
abdominal cavity | 1.23e-09 | 6 |
visceral peritoneum | 1.23e-09 | 6 |
skeletal muscle tissue | 9.37e-09 | 62 |
striated muscle tissue | 9.37e-09 | 62 |
myotome | 9.37e-09 | 62 |
muscle tissue | 3.04e-08 | 64 |
musculature | 3.04e-08 | 64 |
musculature of body | 3.04e-08 | 64 |
integument | 8.26e-08 | 46 |
integumental system | 8.26e-08 | 46 |
skin of body | 1.69e-07 | 41 |
dense mesenchyme tissue | 1.73e-07 | 73 |
surface structure | 2.20e-07 | 99 |
somite | 2.51e-07 | 71 |
presomitic mesoderm | 2.51e-07 | 71 |
presumptive segmental plate | 2.51e-07 | 71 |
dermomyotome | 2.51e-07 | 71 |
trunk paraxial mesoderm | 2.51e-07 | 71 |
epithelial tube open at both ends | 2.76e-07 | 59 |
blood vessel | 2.76e-07 | 59 |
blood vasculature | 2.76e-07 | 59 |
vascular cord | 2.76e-07 | 59 |
thoracic segment blood vessel | 3.69e-07 | 5 |
subclavian artery | 3.69e-07 | 5 |
paraxial mesoderm | 4.01e-07 | 72 |
presumptive paraxial mesoderm | 4.01e-07 | 72 |