FFCP PHASE1:Hg19::chr11:122852557..122852570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390259 | |EntrezGene=390259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20450 | |HGNC=20450 | ||
|TSSclassifier=strong | |||
|UniProt=Q3C1V8 | |UniProt=Q3C1V8 | ||
|association_with_transcript=-129bp_to_ENST00000343035_5end | |association_with_transcript=-129bp_to_ENST00000343035_5end | ||
|cluster_id=chr11:122852557..122852570,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_2_at_BSX_5end | |description=CAGE_peak_2_at_BSX_5end | ||
|id=chr11:122852557..122852570,- | |id=chr11:122852557..122852570,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:154!3.02e-11!2;DOID:4236!3.02e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.99e-41!2;UBERON:0002757!3.99e-41!2;UBERON:0010134!3.99e-41!2;UBERON:0002784!3.99e-41!2;UBERON:0005408!3.99e-41!2;UBERON:0001899!3.99e-41!2;UBERON:0003296!3.82e-21!4;UBERON:0010133!3.82e-21!4;UBERON:0002022!9.43e-21!1;UBERON:0001894!1.59e-12!7;UBERON:0006222!1.59e-12!7;UBERON:0002360!2.23e-11!2;UBERON:0000094!2.23e-11!2;UBERON:0007645!2.23e-11!2;UBERON:0002148!3.35e-11!2;UBERON:0009662!3.35e-11!2;UBERON:0002680!8.46e-10!9;UBERON:0001895!8.46e-10!9;UBERON:0010092!8.46e-10!9;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0001017!1.83e-08!82;UBERON:0002616!2.03e-08!59;UBERON:0003075!3.63e-08!86;UBERON:0007284!3.63e-08!86;UBERON:0005743!4.52e-08!86;UBERON:0000988!6.78e-08!3;UBERON:0006331!6.78e-08!3;UBERON:0002346!8.44e-08!90;UBERON:0004733!1.42e-07!12;UBERON:0002028!1.42e-07!12;UBERON:0007277!1.42e-07!12;UBERON:0000073!2.63e-07!94;UBERON:0001016!2.63e-07!94;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0004732!4.66e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002360;5.69e-21;2!UBERON:0000094;5.69e-21;2!UBERON:0010743;5.69e-21;2!UBERON:0002037;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0002360,4.66e-21,2;UBERON:0000094,4.66e-21,2;UBERON:0010743,4.66e-21,2;UBERON:0001017,2.54e-08,81;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6;UBERON:0001016,1.45e-07,89;UBERON:0000073,2.03e-07,53;UBERON:0002616,2.03e-07,53;UBERON:0001049,4.58e-07,56;UBERON:0005068,4.58e-07,56;UBERON:0006241,4.58e-07,56;UBERON:0007135,4.58e-07,56 | |||
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|short_description=p2@BSX | |short_description=p2@BSX | ||
}} | }} |
Latest revision as of 08:56, 16 September 2015
Short description: | p2@BSX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BSX_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -129bp_to_ENST00000343035_5end |
EntrezGene: | BSX |
HGNC: | 20450 |
UniProt: | Q3C1V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
meninx | 4.66e-21 | 2 |
membrane organ | 4.66e-21 | 2 |
meningeal cluster | 4.66e-21 | 2 |
central nervous system | 2.54e-08 | 81 |
cerebellum | 6.78e-08 | 6 |
rhombic lip | 6.78e-08 | 6 |
nervous system | 1.45e-07 | 89 |
regional part of nervous system | 2.03e-07 | 53 |
regional part of brain | 2.03e-07 | 53 |
neural tube | 4.58e-07 | 56 |
neural rod | 4.58e-07 | 56 |
future spinal cord | 4.58e-07 | 56 |
neural keel | 4.58e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |