FFCP PHASE1:Hg19::chr17:56565257..56565283,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56565257..56565283,-
|short_description=p2@HSF5
|description=CAGE_peak_2_at_HSF5_5end
|association_with_transcript=438bp_to_BC033017_5end
|EntrezGene=124...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124535 | |EntrezGene=124535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26862 | |HGNC=26862 | ||
|TSSclassifier=strong | |||
|UniProt=Q4G112 | |UniProt=Q4G112 | ||
|association_with_transcript=438bp_to_BC033017_5end | |||
|cluster_id=chr17:56565257..56565283,- | |||
|coexpression_cluster_id=C1053 | |||
|description=CAGE_peak_2_at_HSF5_5end | |||
|id=chr17:56565257..56565283,- | |||
|ontology_enrichment_celltype=CL:0000791!1.12e-21!18;CL:0000789!1.12e-21!18;CL:0002420!1.12e-21!18;CL:0002419!1.12e-21!18;CL:0000790!1.12e-21!18;CL:0000838!1.89e-20!52;CL:0000542!7.85e-20!53;CL:0000051!7.85e-20!53;CL:0000738!4.62e-18!140;CL:0002087!3.12e-14!119;CL:0000084!9.22e-14!25;CL:0000827!9.22e-14!25;CL:0002031!2.52e-13!124;CL:0000625!3.01e-13!11;CL:0000037!1.27e-12!172;CL:0000566!1.27e-12!172;CL:0000988!1.89e-11!182;CL:0000236!3.53e-11!14;CL:0002032!5.72e-10!165;CL:0000837!5.72e-10!165;CL:0000624!4.39e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-41;18!CL:0000789;1.94e-41;18!CL:0002419;1.94e-41;18!CL:0000084;2.14e-28;25!CL:0000542;4.47e-25;53!CL:0000625;1.21e-24;11!CL:0000236;8.78e-24;13!CL:0000624;2.13e-16;6!CL:0000945;1.30e-11;24!CL:0000898;5.23e-09;3!CL:0000226;2.67e-08;3!CL:0000842;2.67e-08;3!CL:0000623;4.72e-08;3!CL:0002087;1.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.67e-43,52;CL:0000542,7.49e-42,53;CL:0000051,7.49e-42,53;CL:0000791,2.07e-41,18;CL:0000789,2.07e-41,18;CL:0002420,2.07e-41,18;CL:0002419,2.07e-41,18;CL:0000790,2.07e-41,18;CL:0000084,2.24e-28,25;CL:0000827,2.24e-28,25;CL:0000625,1.17e-24,11;CL:0000236,6.55e-22,14;CL:0002087,2.72e-20,115;CL:0000738,9.50e-17,136;CL:0000624,2.02e-16,6;CL:0002031,2.52e-15,120;CL:0000037,1.46e-13,168;CL:0000988,2.35e-12,177;CL:0000945,1.26e-11,24;CL:0000826,1.26e-11,24;CL:0002032,6.59e-11,161;CL:0000837,6.59e-11,161;CL:0000898,4.97e-09,3;CL:0000226,3.06e-08,3;CL:0000842,3.06e-08,3;CL:0000623,4.45e-08,3;CL:0000825,4.45e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-41;18!CL:0000051;4.47e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0002193!2.25e-07!112;UBERON:0002390!7.51e-07!102;UBERON:0003061!7.51e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-17;15!UBERON:0000179;2.94e-17;15!UBERON:0000463;2.94e-17;15!UBERON:0002390;1.26e-16;32!UBERON:0002193;1.58e-11;42!UBERON:0004177;6.14e-08;5!UBERON:0005057;6.14e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.93e-17,15;UBERON:0000179,3.93e-17,15;UBERON:0000463,3.93e-17,15;UBERON:0004177,4.40e-12,7;UBERON:0005057,4.40e-12,7;UBERON:0002370,2.49e-10,4;UBERON:0005058,2.49e-10,4;UBERON:0009113,2.49e-10,4;UBERON:0003295,2.49e-10,4;UBERON:0005562,2.49e-10,4;UBERON:0003351,7.12e-07,6 | |||
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| ||
|short_description=p2@HSF5 | |||
}} | }} |
Latest revision as of 11:32, 16 September 2015
Short description: | p2@HSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HSF5_5end |
Coexpression cluster: | C1053_CD19_CD4_Natural_CD8_Peripheral_granulocyte_tonsil |
Association with transcript: | 438bp_to_BC033017_5end |
EntrezGene: | HSF5 |
HGNC: | 26862 |
UniProt: | Q4G112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.67e-43 | 52 |
lymphocyte | 7.49e-42 | 53 |
common lymphoid progenitor | 7.49e-42 | 53 |
mature alpha-beta T cell | 2.07e-41 | 18 |
alpha-beta T cell | 2.07e-41 | 18 |
immature T cell | 2.07e-41 | 18 |
mature T cell | 2.07e-41 | 18 |
immature alpha-beta T cell | 2.07e-41 | 18 |
T cell | 2.24e-28 | 25 |
pro-T cell | 2.24e-28 | 25 |
CD8-positive, alpha-beta T cell | 1.17e-24 | 11 |
B cell | 6.55e-22 | 14 |
nongranular leukocyte | 2.72e-20 | 115 |
leukocyte | 9.50e-17 | 136 |
CD4-positive, alpha-beta T cell | 2.02e-16 | 6 |
hematopoietic lineage restricted progenitor cell | 2.52e-15 | 120 |
hematopoietic stem cell | 1.46e-13 | 168 |
hematopoietic cell | 2.35e-12 | 177 |
lymphocyte of B lineage | 1.26e-11 | 24 |
pro-B cell | 1.26e-11 | 24 |
hematopoietic oligopotent progenitor cell | 6.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.59e-11 | 161 |
naive T cell | 4.97e-09 | 3 |
single nucleate cell | 3.06e-08 | 3 |
mononuclear cell | 3.06e-08 | 3 |
natural killer cell | 4.45e-08 | 3 |
pro-NK cell | 4.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.93e-17 | 15 |
haemolymphatic fluid | 3.93e-17 | 15 |
organism substance | 3.93e-17 | 15 |
hemopoietic organ | 4.40e-12 | 7 |
immune organ | 4.40e-12 | 7 |
thymus | 2.49e-10 | 4 |
hemolymphoid system gland | 2.49e-10 | 4 |
thymic region | 2.49e-10 | 4 |
pharyngeal gland | 2.49e-10 | 4 |
thymus primordium | 2.49e-10 | 4 |
pharyngeal epithelium | 7.12e-07 | 6 |