FFCP PHASE1:Hg19::chr10:115478975..115478993,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1508 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000468790_5end | |||
|cluster_id=chr10:115478975..115478993,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_12_at_CASP7_5end | |||
|id=chr10:115478975..115478993,+ | |||
|ontology_enrichment_celltype=CL:0000815!1.05e-09!2;CL:0000792!1.05e-09!2;CL:0002677!1.05e-09!2;CL:0000080!1.27e-07!6;CL:0000988!4.33e-07!182;CL:0000624!6.42e-07!6;CL:0000775!9.28e-07!3;CL:0000898!9.83e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.25e-19;1 | |||
|ontology_enrichment_disease=DOID:1036!6.32e-09!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!7.39e-10!2;UBERON:0000059!6.34e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.62e-26;11!UBERON:0000160;5.45e-25;17!UBERON:0005409;1.32e-19;22!UBERON:0001154;3.25e-19;1!UBERON:0001153;3.25e-19;1!UBERON:0009854;3.25e-19;1!UBERON:0001155;1.17e-18;9!UBERON:0002331;4.85e-17;10!UBERON:0004907;2.25e-15;5!UBERON:0004921;1.03e-11;33!UBERON:0000178;1.39e-11;15!UBERON:0000179;1.39e-11;15!UBERON:0000463;1.39e-11;15!UBERON:0000478;1.87e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.68e-26,11;UBERON:0000160,5.73e-25,17;UBERON:0001154,3.25e-19,1;UBERON:0001153,3.25e-19,1;UBERON:0001045,3.25e-19,1;UBERON:0001155,1.17e-18,9;UBERON:0005409,2.38e-17,25;UBERON:0002331,4.72e-17,10;UBERON:0000358,4.72e-17,10;UBERON:0000307,4.72e-17,10;UBERON:0000091,4.72e-17,10;UBERON:0000087,4.72e-17,10;UBERON:0007010,4.72e-17,10;UBERON:0007806,4.72e-17,10;UBERON:0008780,4.72e-17,10;UBERON:0005728,4.72e-17,10;UBERON:0004907,2.34e-15,5;UBERON:0000178,1.37e-11,15;UBERON:0000179,1.37e-11,15;UBERON:0000463,1.37e-11,15;UBERON:0000478,1.84e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.668745981562712,0.977766799900771,0,1.94826728407911,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92419999510413,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,3.03912307084262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.784250137270958,0.839107934879214,0.569261198172555,0,0,0,0,0,10.9478812418636,2.21143911258348,0,19.8669156216017,7.29027239784367,5.95205112181096,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72653191953094,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,7.05475944542284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80822463617505,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@CASP7 | |||
}} |
Latest revision as of 12:03, 16 September 2015
Short description: | p12@CASP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CASP7_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 6bp_to_ENST00000468790_5end |
EntrezGene: | CASP7 |
HGNC: | 1508 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 1.68e-26 | 11 |
intestine | 5.73e-25 | 17 |
vermiform appendix | 3.25e-19 | 1 |
caecum | 3.25e-19 | 1 |
midgut | 3.25e-19 | 1 |
colon | 1.17e-18 | 9 |
gastrointestinal system | 2.38e-17 | 25 |
umbilical cord | 4.72e-17 | 10 |
blastocyst | 4.72e-17 | 10 |
blastula | 4.72e-17 | 10 |
bilaminar disc | 4.72e-17 | 10 |
inner cell mass | 4.72e-17 | 10 |
cleaving embryo | 4.72e-17 | 10 |
connecting stalk | 4.72e-17 | 10 |
inner cell mass derived epiblast | 4.72e-17 | 10 |
extraembryonic mesoderm | 4.72e-17 | 10 |
lower digestive tract | 2.34e-15 | 5 |
blood | 1.37e-11 | 15 |
haemolymphatic fluid | 1.37e-11 | 15 |
organism substance | 1.37e-11 | 15 |
extraembryonic structure | 1.84e-07 | 24 |