FFCP PHASE1:Hg19::chr1:235490525..235490573,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:235490525..235490573,+
|short_description=p5@GGPS1
|description=CAGE_peak_5_at_GGPS1_5end
|association_with_transcript=-91bp_to_ENST00000488594_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9453 | |EntrezGene=9453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4249 | |HGNC=4249 | ||
|TSSclassifier=strong | |||
|UniProt=O95749 | |UniProt=O95749 | ||
|association_with_transcript=-91bp_to_ENST00000488594_5end | |||
|cluster_id=chr1:235490525..235490573,+ | |||
|coexpression_cluster_id=C213 | |||
|description=CAGE_peak_5_at_GGPS1_5end | |||
|id=chr1:235490525..235490573,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.35e-61!140;CL:0000037!2.21e-49!172;CL:0000566!2.21e-49!172;CL:0000988!1.58e-47!182;CL:0002031!5.01e-46!124;CL:0002087!9.18e-46!119;CL:0002032!6.30e-44!165;CL:0000837!6.30e-44!165;CL:0002057!8.56e-42!42;CL:0000860!7.95e-40!45;CL:0000766!2.66e-35!76;CL:0000557!2.93e-28!71;CL:0002009!2.82e-27!65;CL:0000839!1.15e-25!70;CL:0000763!1.71e-25!112;CL:0000049!1.71e-25!112;CL:0002194!2.98e-25!63;CL:0000576!2.98e-25!63;CL:0000040!2.98e-25!63;CL:0000559!2.98e-25!63;CL:0000838!3.39e-17!52;CL:0000542!1.13e-16!53;CL:0000051!1.13e-16!53;CL:0000134!2.46e-15!358;CL:0002320!1.80e-14!365;CL:0000219!6.01e-12!390;CL:0002393!2.83e-11!9;CL:0002397!2.83e-11!9;CL:0000094!3.00e-11!8;CL:0000034!1.18e-10!444;CL:0000048!5.77e-10!430;CL:0000081!1.47e-09!11;CL:0000236!1.81e-09!14;CL:0000723!1.93e-09!436;CL:0000624!2.90e-09!6;CL:0000945!2.97e-09!24;CL:0000826!2.97e-09!24;CL:0000791!5.87e-09!18;CL:0000789!5.87e-09!18;CL:0002420!5.87e-09!18;CL:0002419!5.87e-09!18;CL:0000790!5.87e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-19;33!CL:0002057;1.50e-19;33!CL:0000624;1.63e-16;6!CL:0000094;4.58e-16;8!CL:0000576;5.92e-15;48!CL:0002087;1.03e-14;104!CL:0000081;1.57e-14;11!CL:0000766;2.01e-14;69!CL:0000473;4.00e-13;39!CL:0000234;4.00e-13;39!CL:0002393;2.04e-11;6!CL:0002397;2.04e-11;6!CL:0000791;2.64e-11;18!CL:0000789;2.64e-11;18!CL:0002419;2.64e-11;18!CL:0000738;8.34e-11;136!CL:0000623;5.37e-10;3!CL:0000767;6.12e-09;3!CL:0000898;1.31e-08;3!CL:0000226;2.20e-08;3!CL:0000842;2.20e-08;3!CL:0000542;2.71e-08;53!CL:0000784;3.55e-08;3!CL:0000763;3.73e-08;100!CL:0000988;6.78e-08;177!CL:0000219;9.98e-08;193!CL:0000084;1.29e-07;25!CL:0000771;4.81e-07;2!CL:0000236;6.99e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.20e-57,136;CL:0000037,2.58e-45,168;CL:0000988,6.89e-44,177;CL:0002031,1.95e-39,120;CL:0002087,7.91e-38,115;CL:0002032,2.67e-37,161;CL:0000837,2.67e-37,161;CL:0000766,3.28e-35,72;CL:0000860,3.78e-30,42;CL:0002057,3.78e-30,42;CL:0000557,9.89e-27,67;CL:0000473,1.57e-25,48;CL:0000234,1.57e-25,48;CL:0002009,6.63e-24,61;CL:0000763,2.18e-23,108;CL:0000049,2.18e-23,108;CL:0000839,3.14e-23,66;CL:0002194,6.28e-21,59;CL:0000576,6.28e-21,59;CL:0000040,6.28e-21,59;CL:0000559,6.28e-21,59;CL:0000624,1.65e-16,6;CL:0000094,4.00e-16,8;CL:0000134,3.34e-15,354;CL:0002320,1.29e-14,361;CL:0000081,1.62e-14,11;CL:0000838,5.48e-13,52;CL:0000542,1.18e-12,53;CL:0000051,1.18e-12,53;CL:0000219,1.48e-12,386;CL:0000791,2.71e-11,18;CL:0000789,2.71e-11,18;CL:0002420,2.71e-11,18;CL:0002419,2.71e-11,18;CL:0000790,2.71e-11,18;CL:0000034,3.44e-11,441;CL:0002393,3.30e-10,9;CL:0002397,3.30e-10,9;CL:0000048,4.69e-10,427;CL:0000623,5.39e-10,3;CL:0000825,5.39e-10,3;CL:0000723,1.03e-09,433;CL:0000767,6.22e-09,3;CL:0000898,1.34e-08,3;CL:0000226,2.51e-08,3;CL:0000842,2.51e-08,3;CL:0000784,3.79e-08,3;CL:0000084,1.32e-07,25;CL:0000827,1.32e-07,25;CL:0000771,4.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.50e-21;42!CL:0000790;2.64e-11;18!CL:0000051;2.71e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.94e-27!102;UBERON:0003061!4.94e-27!102;UBERON:0002371!9.74e-25!80;UBERON:0002193!6.66e-24!112;UBERON:0001474!6.32e-22!86;UBERON:0004765!2.70e-17!101;UBERON:0001434!2.70e-17!101;UBERON:0002405!8.25e-16!115;UBERON:0002384!2.66e-13!375;UBERON:0003081!1.74e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-24,98;UBERON:0003061,1.23e-24,98;UBERON:0002371,1.99e-24,76;UBERON:0001474,4.80e-22,82;UBERON:0002193,1.75e-21,108;UBERON:0002405,4.64e-20,93;UBERON:0004765,2.29e-19,90;UBERON:0001434,1.25e-16,100;UBERON:0002384,8.11e-14,371;UBERON:0003081,2.54e-07,203;UBERON:0002204,5.68e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,7.08055698328027,3.83829398097213,4.18003532953405,0,0,0,0,0,2.34880351467878,13.8498852132969,13.6370224279696,13.0206522429511,0,0,0,0.290796477559129,0,0.970336244751265,0.929716147622738,0,0.619412741790207,2.8769239232215,1.0246428261164,4.7296445977717,6.20542225325913,1.93645405075148,9.47985406160392,0.941211697713023,0.545812300115692,0.224723484445085,7.34601341690166,3.53021929783703,5.11469700639233,0.329851300186716,0.398927315243264,0.852449501065388,5.5139755339431,5.10646702222026,3.11411124497787,1.7587406567972,1.5644487552606,1.52032191293582,5.44859552370032,5.52416453981347,7.59509729858123,0.211255286311942,1.27562579979026,1.67726916406701,0.22465726229299,0.600707571366025,0.48217676009124,1.14005097496499,0.99458338599545,0.365328307529268,0,1.09227722252426,0.889509253863555,4.26730222566507,0.400395987036012,0.574752439954483,0,1.90810750907073,6.26134266020393,10.5702694086769,8.79228424688026,5.28685314316103,3.36305137788922,1.31692042387539,9.83548850569165,12.9693551707224,12.7472929379696,0.83593247695339,3.58514493296949,1.4203434172042,3.89653456815823,1.11410456885174,1.47302953737419,1.99380505125259,2.70803863765016,0.896639238079726,1.8208308658383,0,0.552700035571697,0.289803085735052,2.37258501059297,1.87278579662799,3.1360657141493,0,8.04763036564035,7.21617635513523,2.02415753615602,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,11.289977620585,14.4417705723094,14.1927915805143,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,2.85997455390064,1.48583000531826,0,0,0,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0.112611480483322,0,0,0,14.495845917967,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5505838569619,17.4658335636209,22.8450604577952,0,0,0,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,5.60856922128404,2.881644060693,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.492339221844278,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,1.18608451472249,0,0.522109747527277,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,1.799791132412,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0.544017803369474,1.5041393641362,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,7.08055698328027,3.83829398097213,4.18003532953405,0,0,0,0,0,2.34880351467878,13.8498852132969,13.6370224279696,13.0206522429511,0,0,0,0.290796477559129,0,0.970336244751265,0.929716147622738,0,0.619412741790207,2.8769239232215,1.0246428261164,4.7296445977717,6.20542225325913,1.93645405075148,9.47985406160392,0.941211697713023,0.545812300115692,0.224723484445085,7.34601341690166,3.53021929783703,5.11469700639233,0.329851300186716,0.398927315243264,0.852449501065388,5.5139755339431,5.10646702222026,3.11411124497787,1.7587406567972,1.5644487552606,1.52032191293582,5.44859552370032,5.52416453981347,7.59509729858123,0.211255286311942,1.27562579979026,1.67726916406701,0.22465726229299,0.600707571366025,0.48217676009124,1.14005097496499,0.99458338599545,0.365328307529268,0,1.09227722252426,0.889509253863555,4.26730222566507,0.400395987036012,0.574752439954483,0,1.90810750907073,6.26134266020393,10.5702694086769,8.79228424688026,5.28685314316103,3.36305137788922,1.31692042387539,9.83548850569165,12.9693551707224,12.7472929379696,0.83593247695339,3.58514493296949,1.4203434172042,3.89653456815823,1.11410456885174,1.47302953737419,1.99380505125259,2.70803863765016,0.896639238079726,1.8208308658383,0,0.552700035571697,0.289803085735052,2.37258501059297,1.87278579662799,3.1360657141493,0,8.04763036564035,7.21617635513523,2.02415753615602,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,11.289977620585,14.4417705723094,14.1927915805143,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,2.85997455390064,1.48583000531826,0,0,0,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0.112611480483322,0,0,0,14.495845917967,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5505838569619,17.4658335636209,22.8450604577952,0,0,0,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,5.60856922128404,2.881644060693,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.492339221844278,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,1.18608451472249,0,0.522109747527277,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,1.799791132412,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0.544017803369474,1.5041393641362,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@GGPS1 | |||
}} | }} |
Latest revision as of 12:28, 16 September 2015
Short description: | p5@GGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GGPS1_5end |
Coexpression cluster: | C213_CD14_Natural_CD8_CD4_Basophils_Eosinophils_Peripheral |
Association with transcript: | -91bp_to_ENST00000488594_5end |
EntrezGene: | GGPS1 |
HGNC: | 4249 |
UniProt: | O95749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-24 | 98 |
blood island | 1.23e-24 | 98 |
bone marrow | 1.99e-24 | 76 |
bone element | 4.80e-22 | 82 |
hemolymphoid system | 1.75e-21 | 108 |
immune system | 4.64e-20 | 93 |
skeletal element | 2.29e-19 | 90 |
skeletal system | 1.25e-16 | 100 |
connective tissue | 8.11e-14 | 371 |
lateral plate mesoderm | 2.54e-07 | 203 |
musculoskeletal system | 5.68e-07 | 167 |