FFCP PHASE1:Hg19::chr2:24346163..24346180,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31103 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000465360_5end | |||
|cluster_id=chr2:24346163..24346180,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_PFN4_5end | |||
|id=chr2:24346163..24346180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!UBERON:0006215;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.75e-10!115;UBERON:0001017!4.92e-07!82;UBERON:0005743!5.49e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0002037;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0002037,7.25e-08,6;UBERON:0006215,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,7.98972360536047,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0.295547618953547,0,0.21787692703798,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,13.7917230757196,25.7245564949931,0,0.310298987585686,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@PFN4 | |||
}} |
Latest revision as of 12:35, 16 September 2015
Short description: | p5@PFN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PFN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 8bp_to_ENST00000465360_5end |
EntrezGene: | PFN4 |
HGNC: | 31103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
cerebellum | 7.25e-08 | 6 |
rhombic lip | 7.25e-08 | 6 |