FFCP PHASE1:Hg19::chr1:120905986..120906002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20560 | |HGNC=20560 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000430394_5end | |association_with_transcript=-25bp_to_ENST00000430394_5end | ||
|cluster_id=chr1:120905986..120906002,+ | |||
|coexpression_cluster_id=C600 | |||
|description=CAGE_peak_1_at_HIST2H2BA_5end | |description=CAGE_peak_1_at_HIST2H2BA_5end | ||
|id=chr1:120905986..120906002,+ | |id=chr1:120905986..120906002,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.06e-10!42;CL:0000860!7.47e-09!45 | |ontology_enrichment_celltype=CL:0002057!2.06e-10!42;CL:0000860!7.47e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-10;33!CL:0002057;3.27e-10;33!CL:0000473;1.16e-07;39!CL:0000234;1.16e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.14e-12,42;CL:0002057,5.14e-12,42;CL:0000473,4.80e-11,48;CL:0000234,4.80e-11,48;CL:0000839,8.96e-08,66;CL:0000557,1.43e-07,67;CL:0000766,4.82e-07,72;CL:0002009,9.58e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.65e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.17e-08!167;UBERON:0001737!1.80e-07!9 | |ontology_enrichment_uberon=UBERON:0002204!6.17e-08!167;UBERON:0001737!1.80e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.31e-08;9!UBERON:0001557;4.31e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.08e-09,167;UBERON:0002371,2.95e-08,76;UBERON:0001737,4.51e-08,9;UBERON:0004765,8.57e-08,90;UBERON:0001474,1.38e-07,82;UBERON:0001434,5.38e-07,100 | |||
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| ||
|short_description=p1@HIST2H2BA | |short_description=p1@HIST2H2BA | ||
}} | }} |
Latest revision as of 12:52, 16 September 2015
Short description: | p1@HIST2H2BA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIST2H2BA_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | -25bp_to_ENST00000430394_5end |
EntrezGene: | NA |
HGNC: | 20560 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.14e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.14e-12 | 42 |
defensive cell | 4.80e-11 | 48 |
phagocyte | 4.80e-11 | 48 |
myeloid lineage restricted progenitor cell | 8.96e-08 | 66 |
granulocyte monocyte progenitor cell | 1.43e-07 | 67 |
myeloid leukocyte | 4.82e-07 | 72 |
macrophage dendritic cell progenitor | 9.58e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.08e-09 | 167 |
bone marrow | 2.95e-08 | 76 |
larynx | 4.51e-08 | 9 |
skeletal element | 8.57e-08 | 90 |
bone element | 1.38e-07 | 82 |
skeletal system | 5.38e-07 | 100 |