FFCP PHASE1:Hg19::chr4:164087945..164087959,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:164087945..164087959,- to FFCP PHASE1:Hg19::chr4:164087945..164087959,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92345 | |EntrezGene=92345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25126 | |HGNC=25126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000509232_5end | |||
|cluster_id=chr4:164087945..164087959,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_NAF1_5end | |||
|id=chr4:164087945..164087959,- | |||
|ontology_enrichment_celltype=CL:0002057!1.85e-20!42;CL:0000860!6.50e-19!45;CL:0000738!1.80e-17!140;CL:0000037!1.21e-16!172;CL:0000566!1.21e-16!172;CL:0000988!6.96e-16!182;CL:0002087!5.74e-15!119;CL:0002031!6.75e-15!124;CL:0002032!9.40e-15!165;CL:0000837!9.40e-15!165;CL:0000557!1.46e-13!71;CL:0002009!2.34e-12!65;CL:0000766!5.85e-12!76;CL:0000763!1.45e-11!112;CL:0000049!1.45e-11!112;CL:0002194!2.45e-11!63;CL:0000576!2.45e-11!63;CL:0000040!2.45e-11!63;CL:0000559!2.45e-11!63;CL:0000839!3.91e-11!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-38;33!CL:0002057;1.36e-38;33!CL:0000473;7.88e-26;39!CL:0000234;7.88e-26;39!CL:0000576;1.98e-20;48!CL:0000766;4.33e-15;69!CL:0002087;1.62e-14;104!CL:0000624;3.35e-14;6!CL:0000791;1.38e-09;18!CL:0000789;1.38e-09;18!CL:0002419;1.38e-09;18!CL:0000084;1.52e-09;25!CL:0000738;2.55e-09;136!CL:0000623;3.58e-08;3!CL:0000226;4.14e-08;3!CL:0000842;4.14e-08;3!CL:0000898;2.93e-07;3!CL:0000767;4.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.46e-42,136;CL:0000860,4.49e-40,42;CL:0002057,4.49e-40,42;CL:0002087,6.54e-39,115;CL:0002031,1.00e-36,120;CL:0000473,5.46e-34,48;CL:0000234,5.46e-34,48;CL:0000037,5.64e-33,168;CL:0000988,7.61e-32,177;CL:0000557,3.98e-31,67;CL:0002009,1.28e-30,61;CL:0002032,3.89e-29,161;CL:0000837,3.89e-29,161;CL:0000766,3.44e-28,72;CL:0002194,1.85e-27,59;CL:0000576,1.85e-27,59;CL:0000040,1.85e-27,59;CL:0000559,1.85e-27,59;CL:0000839,1.24e-25,66;CL:0000763,1.47e-19,108;CL:0000049,1.47e-19,108;CL:0000624,3.70e-14,6;CL:0000134,1.22e-11,354;CL:0002320,4.05e-11,361;CL:0000791,1.48e-09,18;CL:0000789,1.48e-09,18;CL:0002420,1.48e-09,18;CL:0002419,1.48e-09,18;CL:0000790,1.48e-09,18;CL:0000084,1.63e-09,25;CL:0000827,1.63e-09,25;CL:0000838,2.65e-09,52;CL:0000219,2.67e-09,386;CL:0000542,4.76e-09,53;CL:0000051,4.76e-09,53;CL:0000623,2.71e-08,3;CL:0000825,2.71e-08,3;CL:0000226,4.41e-08,3;CL:0000842,4.41e-08,3;CL:0000034,2.07e-07,441;CL:0000767,2.18e-07,3;CL:0000898,3.21e-07,3;CL:0000048,4.02e-07,427;CL:0000723,7.92e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.17e-30;42!CL:0000790;1.38e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-11!80;UBERON:0001474!2.91e-11!86;UBERON:0002390!4.46e-11!102;UBERON:0003061!4.46e-11!102;UBERON:0002193!5.65e-09!112;UBERON:0004765!7.15e-08!101;UBERON:0001434!7.15e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.55e-28,76;UBERON:0002390,3.06e-27,98;UBERON:0003061,3.06e-27,98;UBERON:0001474,3.53e-27,82;UBERON:0004765,6.78e-24,90;UBERON:0002193,1.01e-23,108;UBERON:0002405,1.26e-22,93;UBERON:0001434,1.54e-20,100;UBERON:0002204,6.67e-11,167;UBERON:0002384,2.06e-10,371;UBERON:0003081,3.22e-09,203 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.236132343941038,1.96682138424452,1.91914699048606,1.54816123316076,0.919421224478927,0,0,0.619737604642413,0.426507697462265,0.293600439334847,3.32397245119126,1.60435557976113,2.82114131930607,0,0.32389366601898,0.257575567634187,0.726991193897824,1.13362783106643,0.242584061187816,1.85943229524548,4.52284676824008,5.57471467611186,1.7261543539329,2.0492856522328,8.27687804610048,7.58440497620561,18.719055823931,20.3139729891513,3.38836211176688,2.45615535052061,5.61808711112712,17.1406979727705,21.1813157870222,27.4914964093588,0.329851300186716,0.199463657621632,0.426224750532694,6.96502172708602,6.80862269629368,9.9651559839292,3.76872997885115,4.17186334736161,7.8187984093842,1.21079900526674,10.6800514436394,9.81033401066742,0.845021145247767,0.212604299965044,0,0.44931452458598,0,0.48217676009124,0.285012743741249,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,2.84606484554724,3.52342313622563,3.05818582500183,1.32171328579026,3.36305137788922,0,5.70458333330116,5.10913991573914,7.81285696198135,0,2.60737813306872,1.4203434172042,1.94826728407911,0.222820913770347,1.47302953737419,1.55073726208535,2.16643091012012,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,3.11401782640327,2.1403266247177,3.1360657141493,0.113309342697566,1.14966148080576,4.12352934579156,2.53019692019503,0,0,0,0.150575119077773,0,0,0.710331756132051,0,8.0642697289893,5.34880391567015,4.19990771260117,0,0,0,0.361439152384566,1.50401373190767,0,1.5905718941022,0,0,0,0.43917392846563,0.196468613246569,0,0,0,0,0,1.43094374583205,1.14398982156026,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0.515281080091258,0.558350568994769,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0.487894824518382,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0.581267877027924,0,3.4486426652716,0,0.621984346622316,0.144119953416961,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,3.54655368363469,4.74380664690938,3.59360501583295,0,0,0,0,0,0.749007023947182,0,0,0.36807447515742,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,2.06768026122887,3.45142721309787,5.33637789017222,0.303127571446259,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.213425530045242,0.159426272728822,0.798317485731266,0.5745161103971,0.211673582723883,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0.677167111206413,0.321176150207399,0.605399121573143,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0.278406173895242,0,0.270455678475983,0,0,0.561421621224659,0,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0.222617410045812,1.48323486804084,0.63337622438398,0.796991953004279,1.10513566212459,1.0077309914171,0.102268682502155,0.492339221844278,0.311039587661807,0.0898683511473268,0.179021174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| ||
|short_description=p2@NAF1 | |||
}} | }} |
Latest revision as of 13:11, 16 September 2015
Short description: | p2@NAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 23bp_to_ENST00000509232_5end |
EntrezGene: | NAF1 |
HGNC: | 25126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.55e-28 | 76 |
hematopoietic system | 3.06e-27 | 98 |
blood island | 3.06e-27 | 98 |
bone element | 3.53e-27 | 82 |
skeletal element | 6.78e-24 | 90 |
hemolymphoid system | 1.01e-23 | 108 |
immune system | 1.26e-22 | 93 |
skeletal system | 1.54e-20 | 100 |
musculoskeletal system | 6.67e-11 | 167 |
connective tissue | 2.06e-10 | 371 |
lateral plate mesoderm | 3.22e-09 | 203 |