FFCP PHASE1:Hg19::chr1:236030143..236030165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000468626_5end | |association_with_transcript=9bp_to_ENST00000468626_5end | ||
|cluster_id=chr1:236030143..236030165,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_LYST_5end | |description=CAGE_peak_5_at_LYST_5end | ||
|id=chr1:236030143..236030165,- | |id=chr1:236030143..236030165,- | ||
|ontology_enrichment_celltype=CL:0000738!3.01e-39!140;CL:0000037!1.38e-36!172;CL:0000566!1.38e-36!172;CL:0000988!1.65e-34!182;CL:0002032!6.83e-33!165;CL:0000837!6.83e-33!165;CL:0002031!2.11e-27!124;CL:0000766!2.11e-27!76;CL:0002087!9.81e-27!119;CL:0000763!7.81e-25!112;CL:0000049!7.81e-25!112;CL:0000557!5.61e-22!71;CL:0002057!2.03e-21!42;CL:0000839!3.41e-20!70;CL:0000860!7.51e-19!45;CL:0002194!1.71e-18!63;CL:0000576!1.71e-18!63;CL:0000040!1.71e-18!63;CL:0000559!1.71e-18!63;CL:0002009!2.51e-18!65;CL:0002393!1.08e-08!9;CL:0002397!1.08e-08!9;CL:0000094!3.76e-08!8;CL:0000838!4.78e-08!52;CL:0000542!1.09e-07!53;CL:0000051!1.09e-07!53 | |ontology_enrichment_celltype=CL:0000738!3.01e-39!140;CL:0000037!1.38e-36!172;CL:0000566!1.38e-36!172;CL:0000988!1.65e-34!182;CL:0002032!6.83e-33!165;CL:0000837!6.83e-33!165;CL:0002031!2.11e-27!124;CL:0000766!2.11e-27!76;CL:0002087!9.81e-27!119;CL:0000763!7.81e-25!112;CL:0000049!7.81e-25!112;CL:0000557!5.61e-22!71;CL:0002057!2.03e-21!42;CL:0000839!3.41e-20!70;CL:0000860!7.51e-19!45;CL:0002194!1.71e-18!63;CL:0000576!1.71e-18!63;CL:0000040!1.71e-18!63;CL:0000559!1.71e-18!63;CL:0002009!2.51e-18!65;CL:0002393!1.08e-08!9;CL:0002397!1.08e-08!9;CL:0000094!3.76e-08!8;CL:0000838!4.78e-08!52;CL:0000542!1.09e-07!53;CL:0000051!1.09e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000766;1.50e-15;69!CL:0000094;2.71e-15;8!CL:0000576;6.67e-14;48!CL:0000081;5.37e-13;11!CL:0002393;2.09e-11;6!CL:0002397;2.09e-11;6!CL:0002087;4.91e-11;104!CL:0000624;5.64e-11;6!CL:0000860;7.67e-10;33!CL:0002057;7.67e-10;33!CL:0000738;4.66e-09;136!CL:0000763;7.43e-09;100!CL:0000988;9.65e-09;177!CL:0000791;1.45e-08;18!CL:0000789;1.45e-08;18!CL:0002419;1.45e-08;18!CL:0000775;3.48e-07;3!CL:0000542;3.57e-07;53!CL:0000623;8.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.12e-46,136;CL:0000037,3.55e-43,168;CL:0000988,4.16e-41,177;CL:0002032,5.14e-40,161;CL:0000837,5.14e-40,161;CL:0000766,3.76e-31,72;CL:0000763,1.49e-29,108;CL:0000049,1.49e-29,108;CL:0002087,4.77e-29,115;CL:0002031,7.12e-29,120;CL:0000860,7.31e-22,42;CL:0002057,7.31e-22,42;CL:0000557,2.52e-21,67;CL:0000839,3.79e-20,66;CL:0002194,1.61e-18,59;CL:0000576,1.61e-18,59;CL:0000040,1.61e-18,59;CL:0000559,1.61e-18,59;CL:0000473,3.94e-18,48;CL:0000234,3.94e-18,48;CL:0002009,1.25e-17,61;CL:0002393,2.33e-16,9;CL:0002397,2.33e-16,9;CL:0000094,3.09e-15,8;CL:0000081,7.01e-13,11;CL:0000624,4.17e-11,6;CL:0000134,1.01e-10,354;CL:0002320,3.85e-10,361;CL:0000219,3.87e-10,386;CL:0000838,6.91e-10,52;CL:0000542,1.36e-09,53;CL:0000051,1.36e-09,53;CL:0000791,1.42e-08,18;CL:0000789,1.42e-08,18;CL:0002420,1.42e-08,18;CL:0002419,1.42e-08,18;CL:0000790,1.42e-08,18;CL:0000775,3.33e-07,3;CL:0000623,8.68e-07,3;CL:0000825,8.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.52e-15;42!CL:0000790;1.45e-08;18!CL:0000049;2.10e-08;108!CL:0000051;3.57e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.87e-29!102;UBERON:0003061!3.87e-29!102;UBERON:0002193!1.46e-24!112;UBERON:0002371!1.84e-18!80;UBERON:0001474!1.23e-15!86;UBERON:0004765!2.49e-11!101;UBERON:0001434!2.49e-11!101;UBERON:0000178!8.21e-11!15;UBERON:0000179!8.21e-11!15;UBERON:0000463!8.21e-11!15;UBERON:0002405!1.64e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.96e-15;15!UBERON:0000179;7.96e-15;15!UBERON:0000463;7.96e-15;15!UBERON:0002390;1.08e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.60e-32,98;UBERON:0003061,6.60e-32,98;UBERON:0002193,1.47e-27,108;UBERON:0002371,1.27e-17,76;UBERON:0002405,3.85e-17,93;UBERON:0001474,1.27e-15,82;UBERON:0000178,1.11e-14,15;UBERON:0000179,1.11e-14,15;UBERON:0000463,1.11e-14,15;UBERON:0004765,2.19e-13,90;UBERON:0001434,3.99e-11,100;UBERON:0002384,2.35e-09,371;UBERON:0003081,7.76e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,3.14691421479123,2.30297638858328,3.40595471295367,0,0,0,0,0,0.293600439334847,13.8498852132969,10.4283112684474,12.3696196308036,0,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0.727752183563449,0.929716147622738,1.23350366406548,0.619412741790207,0.28769239232215,0.768482119587302,1.18241114944293,1.72372840368309,1.29096936716765,2.70852973188684,0.564727018627814,0.272906150057846,1.34834090667051,1.53041946185451,1.28371610830437,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,1.16083695451434,3.40431134814684,0,1.25624332628372,0,1.3031330682307,1.21079900526674,1.47311054395026,2.53169909952708,2.5350634357433,3.18906449947565,2.93522103711726,1.68492946719743,3.15371474967163,2.57160938715328,4.84521664360123,5.17183360717634,4.38393969035121,0,2.18455444504853,0,2.13365111283254,1.60158394814405,1.14950487990897,0.661044872784862,0,10.2458334439701,7.04684627245127,8.41001101875504,0,3.92355994087075,0.790152254325231,4.91774425284583,6.6811829667358,4.93443597598822,0.83593247695339,2.60737813306872,2.8406868344084,1.94826728407911,0.891283655081389,2.3568472597987,0.664601683750863,0.812411591295047,0.128091319725675,1.04047478047903,0.986627427622057,0.552700035571697,2.02862160014537,1.33457906845854,1.33770414044857,0,0.566546713487831,5.74830740402882,2.40539211837841,2.53019692019503,0.318565414324097,0,0.950452044448374,1.05402583354441,0.127986611154418,0,0.710331756132051,0,8.66908995866349,8.55808626507223,9.55841065626473,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0.696518949197069,1.06366368415092,0.476981248610684,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.7121669744253,42.6558290563158,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0.122988438543114,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0.179117045405697,0,0,0.985326475791887,0.352193736052904,5.59785911960085,4.75595846275973,9.59442494040488,0.253991577168676,3.05590740446622,2.34434894420094,1.71072446022705,0.514137463516618,0.600686115687835,3.71574362419752,0,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,7.88123040807709,4.74380664690938,8.47064039446339,0.254094624222463,0,0,0,1.27587750330633,26.2152458381514,8.97484377612075,20.3063601583657,0,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.620304078368662,3.66714141391649,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0,2.53723804616085,2.29391162142713,4.5571774973933,4.2881719582402,4.11362273086194,8.43015304550532,3.24018862342869,3.96562588147135,0,0,0,0,0,0.355709216742071,0,0,0.191505370132367,0,4.22008522356922,0.280797178113459,0.456469358066384,2.82023812391442,0,0,0.802940375518498,1.00899853595524,5.11015485228392,0.343505344755765,5.53033375755224,6.03925491309523,4.83862510964535,2.14926904942244,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,1.65770349318689,0.503865495708552,0.511343412510774,0,0,0.0898683511473268,0,6.65044081294933,0.493217028184668,2.3948309234694,0,0,0.463840490809256,1.99613798001194,0,0.174919999992391,0,0,0.254253650292766,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0.278847488557207,0.153900517007594,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,1.18608451472249,0.370691816839509,0.313265848516366,0.134802265961354,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.505492637027904,0.901940516486955,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,7.66479528401834,0,0.262887354279314,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,0,0.242998226632099,0.670869375198532,0,0.0524545881349981,0,0,0.191915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|short_description=p5@LYST | |short_description=p5@LYST | ||
}} | }} |
Latest revision as of 13:13, 16 September 2015
Short description: | p5@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LYST_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 9bp_to_ENST00000468626_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.60e-32 | 98 |
blood island | 6.60e-32 | 98 |
hemolymphoid system | 1.47e-27 | 108 |
bone marrow | 1.27e-17 | 76 |
immune system | 3.85e-17 | 93 |
bone element | 1.27e-15 | 82 |
blood | 1.11e-14 | 15 |
haemolymphatic fluid | 1.11e-14 | 15 |
organism substance | 1.11e-14 | 15 |
skeletal element | 2.19e-13 | 90 |
skeletal system | 3.99e-11 | 100 |
connective tissue | 2.35e-09 | 371 |
lateral plate mesoderm | 7.76e-09 | 203 |