FFCP PHASE1:Hg19::chr1:236046697..236046708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=163bp_to_ENST00000536965_5end | |association_with_transcript=163bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046697..236046708,- | |||
|coexpression_cluster_id=C610 | |coexpression_cluster_id=C610 | ||
|description=CAGE_peak_15_at_LYST_5end | |description=CAGE_peak_15_at_LYST_5end | ||
|id=chr1:236046697..236046708,- | |id=chr1:236046697..236046708,- | ||
|ontology_enrichment_celltype=CL:0000148;6.78e-74;10!CL:0000147;9.47e-53;14!CL:0000453;4.38e-49;5!CL:0002567;5.98e-47;3!CL:0000710;7.20e-37;20!CL:0000990;1.67e-27;8!CL:0000075;3.04e-27;27!CL:0000451;1.38e-22;10!CL:0002077;4.53e-19;34!CL:0002566;2.08e-16;1!CL:0001014;8.74e-09;2!CL:0001016;8.74e-09;2 | |ontology_enrichment_celltype=CL:0000990!1.81e-24!8;CL:0000453!1.53e-23!5;CL:0000148!2.12e-22!10;CL:0000541!2.12e-22!10;CL:0000451!7.68e-20!10;CL:0000147!1.05e-15!14;CL:0002567!3.87e-15!3;CL:0000840!2.43e-12!5;CL:0001029!2.43e-12!5;CL:0000710!1.11e-10!20;CL:0001014!3.06e-10!2;CL:0001016!3.06e-10!2;CL:0000075!1.21e-07!27;CL:0000623!9.89e-07!3;CL:0000825!9.89e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000148;6.78e-74;10!CL:0000147;9.47e-53;14!CL:0000453;4.38e-49;5!CL:0002567;5.98e-47;3!CL:0000710;7.20e-37;20!CL:0000990;1.67e-27;8!CL:0000075;3.04e-27;27!CL:0000451;1.38e-22;10!CL:0002077;4.53e-19;34!CL:0002566;2.08e-16;1!CL:0001014;8.74e-09;2!CL:0001016;8.74e-09;2 | ||
|ontology_enrichment_disease=DOID:0060060;1.12e-16;1!DOID:0060061;1.12e-16;1!DOID:8691;1.12e-16;1!DOID:1909;7.21e-09;2 | |ontology_enrichment_celltype_v019_2=CL:0000148,7.98e-74,10;CL:0000541,7.98e-74,10;CL:0000147,1.06e-52,14;CL:0000453,5.27e-49,5;CL:0002567,5.53e-47,3;CL:0000710,7.81e-37,20;CL:0000990,1.85e-27,8;CL:0000075,3.22e-27,27;CL:0000451,1.50e-22,10;CL:0002077,1.50e-21,34;CL:0000333,5.77e-17,41;CL:0002566,1.93e-16,1;CL:0000133,7.76e-12,59;CL:0000221,1.13e-09,72;CL:0001014,8.74e-09,2;CL:0001016,8.74e-09,2 | ||
|ontology_enrichment_development_v019=CL:0000133;9.19e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!2.43e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.12e-16;1!DOID:0060061;1.12e-16;1!DOID:8691;1.12e-16;1!DOID:1909;7.21e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.86e-17,1;DOID:0060061,8.86e-17,1;DOID:8691,8.86e-17,1;DOID:1909,6.42e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p15@LYST | |short_description=p15@LYST | ||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p15@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 163bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.98e-74 | 10 |
melanoblast | 7.98e-74 | 10 |
pigment cell | 1.06e-52 | 14 |
Langerhans cell | 5.27e-49 | 5 |
light melanocyte | 5.53e-47 | 3 |
neurecto-epithelial cell | 7.81e-37 | 20 |
conventional dendritic cell | 1.85e-27 | 8 |
columnar/cuboidal epithelial cell | 3.22e-27 | 27 |
dendritic cell | 1.50e-22 | 10 |
ecto-epithelial cell | 1.50e-21 | 34 |
migratory neural crest cell | 5.77e-17 | 41 |
dark melanocyte | 1.93e-16 | 1 |
neurectodermal cell | 7.76e-12 | 59 |
ectodermal cell | 1.13e-09 | 72 |
CD1a-positive Langerhans cell | 8.74e-09 | 2 |
immature CD1a-positive Langerhans cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.86e-17 | 1 |
cutaneous T cell lymphoma | 8.86e-17 | 1 |
mycosis fungoides | 8.86e-17 | 1 |
melanoma | 6.42e-09 | 2 |