FFCP PHASE1:Hg19::chr14:92979953..92979978,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:92979953..92979978,+
|short_description=p6@RIN3
|description=CAGE_peak_6_at_RIN3_5end
|association_with_transcript=-139bp_to_ENST00000216487_5end
|Entrez...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79890 | |EntrezGene=79890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |HGNC=18751 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TB24 | |UniProt=Q8TB24 | ||
|association_with_transcript=-139bp_to_ENST00000216487_5end | |||
|cluster_id=chr14:92979953..92979978,+ | |||
|description=CAGE_peak_6_at_RIN3_5end | |||
|id=chr14:92979953..92979978,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.49e-08!70;CL:0000766!1.51e-08!76;CL:0000557!3.27e-08!71;CL:0002057!4.92e-08!42;CL:0002194!6.02e-07!63;CL:0000576!6.02e-07!63;CL:0000040!6.02e-07!63;CL:0000559!6.02e-07!63;CL:0002009!9.51e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.54e-07;39!CL:0000234;5.54e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.64e-11,72;CL:0000557,1.12e-10,67;CL:0000839,2.47e-10,66;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0002194,1.95e-08,59;CL:0000576,1.95e-08,59;CL:0000040,1.95e-08,59;CL:0000559,1.95e-08,59;CL:0002009,2.01e-08,61;CL:0000860,8.41e-08,42;CL:0002057,8.41e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.20e-09!102;UBERON:0003061!9.20e-09!102;UBERON:0002193!3.05e-08!112;UBERON:0002405!8.43e-08!115;UBERON:0001474!1.46e-07!86;UBERON:0002371!1.60e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-11,98;UBERON:0003061,1.04e-11,98;UBERON:0002371,1.87e-10,76;UBERON:0001474,1.96e-10,82;UBERON:0002193,3.91e-10,108;UBERON:0002405,1.40e-09,93;UBERON:0004765,3.95e-08,90;UBERON:0001434,8.67e-08,100;UBERON:0003081,6.15e-07,203 | |||
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| ||
|short_description=p6@RIN3 | |||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p6@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000216487_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.64e-11 | 72 |
granulocyte monocyte progenitor cell | 1.12e-10 | 67 |
myeloid lineage restricted progenitor cell | 2.47e-10 | 66 |
defensive cell | 4.10e-10 | 48 |
phagocyte | 4.10e-10 | 48 |
monopoietic cell | 1.95e-08 | 59 |
monocyte | 1.95e-08 | 59 |
monoblast | 1.95e-08 | 59 |
promonocyte | 1.95e-08 | 59 |
macrophage dendritic cell progenitor | 2.01e-08 | 61 |
classical monocyte | 8.41e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-11 | 98 |
blood island | 1.04e-11 | 98 |
bone marrow | 1.87e-10 | 76 |
bone element | 1.96e-10 | 82 |
hemolymphoid system | 3.91e-10 | 108 |
immune system | 1.40e-09 | 93 |
skeletal element | 3.95e-08 | 90 |
skeletal system | 8.67e-08 | 100 |
lateral plate mesoderm | 6.15e-07 | 203 |