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FFCP PHASE1:Hg19::chr8:134115035..134115072,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6503
|EntrezGene=6503
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10902
|HGNC=10902
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=47bp_to_ENST00000518565_5end
|association_with_transcript=47bp_to_ENST00000518565_5end
|cluster_id=chr8:134115035..134115072,-
|coexpression_cluster_id=C214
|coexpression_cluster_id=C214
|description=CAGE_peak_12_at_SLA_5end
|description=CAGE_peak_12_at_SLA_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0000047!4.16e-11!8;CL:0000540!9.26e-09!6;CL:0000031!9.26e-09!6;CL:0000404!9.26e-09!6;CL:0002319!1.01e-08!25
|ontology_enrichment_celltype=CL:0000047!4.16e-11!8;CL:0000540!9.26e-09!6;CL:0000031!9.26e-09!6;CL:0000404!9.26e-09!6;CL:0002319!1.01e-08!25
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-34;6!CL:0000404;6.35e-34;6!CL:0002319;1.42e-13;25!CL:0000047;2.32e-12;2
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-34;6!CL:0000404;6.35e-34;6!CL:0002319;1.42e-13;25!CL:0000047;2.32e-12;2
|ontology_enrichment_celltype_v019_2=CL:0000047,1.63e-44,8;CL:0000540,6.72e-34,6;CL:0000031,6.72e-34,6;CL:0000404,6.72e-34,6;CL:0002319,1.44e-13,25
|ontology_enrichment_development_v019=CL:0000031;6.35e-34;6
|ontology_enrichment_development_v019=CL:0000031;6.35e-34;6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001017!7.86e-48!82;UBERON:0005743!2.28e-45!86;UBERON:0001893!2.81e-42!34;UBERON:0000073!1.44e-40!94;UBERON:0001016!1.44e-40!94;UBERON:0001869!4.04e-40!32;UBERON:0002619!4.11e-40!22;UBERON:0002791!6.66e-39!33;UBERON:0000955!2.52e-38!69;UBERON:0006238!2.52e-38!69;UBERON:0002020!1.13e-37!34;UBERON:0003528!1.13e-37!34;UBERON:0001049!2.06e-36!57;UBERON:0005068!2.06e-36!57;UBERON:0006241!2.06e-36!57;UBERON:0007135!2.06e-36!57;UBERON:0000956!3.91e-35!25;UBERON:0000203!3.91e-35!25;UBERON:0002616!4.92e-35!59;UBERON:0002780!1.49e-34!41;UBERON:0001890!1.49e-34!41;UBERON:0006240!1.49e-34!41;UBERON:0003080!1.18e-33!42;UBERON:0001950!2.85e-32!20;UBERON:0002346!1.39e-28!90;UBERON:0003075!1.58e-27!86;UBERON:0007284!1.58e-27!86;UBERON:0003056!8.14e-25!61;UBERON:0000924!1.30e-24!173;UBERON:0006601!1.30e-24!173;UBERON:0004121!1.55e-23!169;UBERON:0000033!3.04e-21!123;UBERON:0000153!5.22e-20!129;UBERON:0007811!5.22e-20!129;UBERON:0000349!2.46e-16!5;UBERON:0001872!4.13e-16!5;UBERON:0007023!8.69e-16!115;UBERON:0001954!3.50e-11!2;UBERON:0003022!3.50e-11!2;UBERON:0002421!3.50e-11!2;UBERON:0002600!3.50e-11!2;UBERON:0001871!1.40e-10!7;UBERON:0000025!2.46e-09!194;UBERON:0000200!7.70e-08!6;UBERON:0000988!2.06e-07!3
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|ontology_enrichment_uberon_v019=UBERON:0000922;1.02e-10;49!UBERON:0001950;5.19e-10;20!UBERON:0002619;3.39e-09;22!UBERON:0002114;9.31e-09;2!UBERON:0000956;3.32e-08;25!UBERON:0000203;3.32e-08;25
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.29e-17,81;UBERON:0001016,4.18e-15,89;UBERON:0001950,5.19e-10,20;UBERON:0002619,3.39e-09,22;UBERON:0002114,8.96e-09,2;UBERON:0000956,3.32e-08,25;UBERON:0000203,3.32e-08,25;UBERON:0004121,7.27e-08,171;UBERON:0000924,7.27e-08,171;UBERON:0006601,7.27e-08,171;UBERON:0011216,1.33e-07,223
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|short_description=p12@SLA
|short_description=p12@SLA
}}
}}

Latest revision as of 15:33, 16 September 2015

Short description:p12@SLA
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_12_at_SLA_5end
Coexpression cluster:C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain
Association with transcript: 47bp_to_ENST00000518565_5end
EntrezGene:SLA
HGNC: 10902
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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