FFCP PHASE1:Hg19::chr13:113951188..113951191,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:113951188..113951191,+
|short_description=p21@LAMP1
|description=CAGE_peak_21_at_LAMP1_5end
|association_with_transcript=-277bp_to_NM_005561,uc001vtm.1,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3916 | |EntrezGene=3916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6499 | |HGNC=6499 | ||
|TSSclassifier=strong | |||
|UniProt=P11279 | |UniProt=P11279 | ||
|association_with_transcript=-277bp_to_NM_005561,uc001vtm.1,uc010tka.1_5end | |||
|cluster_id=chr13:113951188..113951191,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_21_at_LAMP1_5end | |||
|id=chr13:113951188..113951191,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.56e-22!63;CL:0000576!2.56e-22!63;CL:0000040!2.56e-22!63;CL:0000559!2.56e-22!63;CL:0002009!1.33e-21!65;CL:0000235!1.03e-20!10;CL:0000839!5.44e-20!70;CL:0000557!1.07e-19!71;CL:0000840!1.71e-19!5;CL:0001029!1.71e-19!5;CL:0000766!2.48e-18!76;CL:0000990!3.30e-13!8;CL:0000763!4.64e-12!112;CL:0000049!4.64e-12!112;CL:0002087!2.83e-11!119;CL:0000451!6.53e-11!10;CL:0002031!9.09e-11!124;CL:0000738!2.20e-09!140;CL:0002032!9.44e-08!165;CL:0000837!9.44e-08!165;CL:0000037!2.23e-07!172;CL:0000566!2.23e-07!172;CL:0000988!6.80e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.63e-75;6!CL:0000840;1.42e-42;5!CL:0000990;1.05e-28;8!CL:0000451;1.18e-23;10!CL:0000473;6.58e-11;39!CL:0000234;6.58e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.22e-75,6;CL:0000840,1.76e-42,5;CL:0001029,1.76e-42,5;CL:0000990,1.21e-28,8;CL:0000451,1.33e-23,10;CL:0002194,2.92e-23,59;CL:0000576,2.92e-23,59;CL:0000040,2.92e-23,59;CL:0000559,2.92e-23,59;CL:0002009,1.60e-22,61;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002087,3.65e-12,115;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0000473,5.35e-10,48;CL:0000234,5.35e-10,48;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.32e-17!80;UBERON:0001474!4.51e-16!86;UBERON:0002171!8.58e-14!1;UBERON:0006518!8.58e-14!1;UBERON:0008949!8.58e-14!1;UBERON:0000101!8.58e-14!1;UBERON:0002167!8.58e-14!1;UBERON:0004765!1.65e-13!101;UBERON:0001434!1.65e-13!101;UBERON:0002390!2.30e-13!102;UBERON:0003061!2.30e-13!102;UBERON:0002193!4.64e-12!112;UBERON:0002405!1.03e-11!115;UBERON:0002204!3.28e-09!167;UBERON:0003081!4.30e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
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|short_description=p21@LAMP1 | |||
}} | }} |
Latest revision as of 15:43, 16 September 2015
Short description: | p21@LAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LAMP1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -277bp_to_NM_005561, uc001vtm.1, uc010tka.1_5end |
EntrezGene: | LAMP1 |
HGNC: | 6499 |
UniProt: | P11279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p21@LAMP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.22e-75 | 6 |
immature conventional dendritic cell | 1.76e-42 | 5 |
common dendritic progenitor | 1.76e-42 | 5 |
conventional dendritic cell | 1.21e-28 | 8 |
dendritic cell | 1.33e-23 | 10 |
monopoietic cell | 2.92e-23 | 59 |
monocyte | 2.92e-23 | 59 |
monoblast | 2.92e-23 | 59 |
promonocyte | 2.92e-23 | 59 |
macrophage dendritic cell progenitor | 1.60e-22 | 61 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |
Showing 1 to 10 of 10 entries