FFCP PHASE1:Hg19::chr8:134262744..134262771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10397 | |EntrezGene=10397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7679 | |HGNC=7679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000522665_5end | |association_with_transcript=-41bp_to_ENST00000522665_5end | ||
|cluster_id=chr8:134262744..134262771,- | |||
|coexpression_cluster_id=C862 | |||
|description=CAGE_peak_3_at_NDRG1_5end | |description=CAGE_peak_3_at_NDRG1_5end | ||
|id=chr8:134262744..134262771,- | |id=chr8:134262744..134262771,- | ||
|ontology_enrichment_celltype=CL:0002057!2.87e-09!42;CL:0000860!8.24e-09!45 | |ontology_enrichment_celltype=CL:0002057!2.87e-09!42;CL:0000860!8.24e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-26;33!CL:0002057;3.51e-26;33!CL:0000473;2.07e-17;39!CL:0000234;2.07e-17;39!CL:0000576;3.28e-11;48!CL:0002368;1.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.68e-21,42;CL:0002057,6.68e-21,42;CL:0000473,3.43e-17,48;CL:0000234,3.43e-17,48;CL:0002194,4.36e-12,59;CL:0000576,4.36e-12,59;CL:0000040,4.36e-12,59;CL:0000559,4.36e-12,59;CL:0002009,1.93e-11,61;CL:0000839,5.25e-10,66;CL:0000557,9.53e-10,67;CL:0000766,2.36e-09,72;CL:0002368,1.36e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002057;5.29e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.21e-09!115;UBERON:0000062!6.30e-08!511;UBERON:0000467!3.22e-07!625;UBERON:0000480!4.57e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!4.21e-09!115;UBERON:0000062!6.30e-08!511;UBERON:0000467!3.22e-07!625;UBERON:0000480!4.57e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-08,76;UBERON:0005423,8.89e-08,581;UBERON:0002050,1.81e-07,564;UBERON:0001474,2.16e-07,82;UBERON:0000923,2.74e-07,560;UBERON:0010316,2.74e-07,560;UBERON:0005291,2.74e-07,560;UBERON:0006598,2.74e-07,560;UBERON:0010317,2.74e-07,560;UBERON:0002532,2.74e-07,560;UBERON:0000922,4.14e-07,592 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.845726424575827,1.0007329835313,0.446961094427288,4.36169262050184,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,1.8072355126695,3.32778609150109,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,1.01778767145695,1.51150377475524,1.69808842831471,1.39457422143411,1.23350366406548,2.16794459626573,4.60307827715441,4.35473201099471,1.6553756092201,1.72372840368309,1.93645405075148,1.35426486594342,2.07066573496865,2.45615535052061,1.57306439111559,3.36692281607993,2.56743221660875,2.55734850319616,1.64925650093358,3.19141852194611,1.70489900213078,1.45104619314292,2.26954089876456,0,1.7587406567972,2.60741459210101,1.52032191293582,1.21079900526674,1.84138817993782,0.316462387440884,0.211255286311942,0,0,0.336985893439485,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0.205601498999509,0.501559486172034,0,0,0,0.445641827540694,0,0,0.270803863765016,0.512365278902701,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0.434473211648397,0,1.34140171940727,0.255725123687061,0,0,1.15877215168659,0,1.94653948121054,0,0,0.087834785693126,0.392937226493138,1.09288586487763,0.370784442784429,0,0.174129737299267,0.26591592103773,0.715471872916026,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0,0,0,0,0,0.183201743930407,1.31780417436063,0,3.92484646928281,0.993943903390637,0.25326102332916,0.264818361626438,0.286836620748814,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.413303124703062,0,0.989067717114227,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0.558350568994769,0.168776332241266,0.487185025805993,0,0.276149695926898,0.646584227275248,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.518305275076852,0,0,4.69348596989448,2.57296375277154,0,0,0.721879481669586,0.591534000199219,0.842923450390509,0.482022059766964,0.772057809126758,0.653638332277218,0.237270619111097,1.34831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,2.52425656439839,1.1240175325762,1.50793458617446,0.740707561268237,0,0,0,0,0,0.866198686566443,1.38895653772983,0.570762456703795,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,1.34337784054272,2.03443756959773,2.68367875415648,0,0.088048434013226,0.829312462163088,0.720599767084807,0.6312121671319,0.126995788584338,0,2.34434894420094,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0,0.2933531432838,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0.289562613335158,1.2328579353023,0.358121926479791,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.630809660135739,0.468565659970853,0.601892199455438,4.5481500811197,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.907170879989041,0.496215615637554,0.153461973288062,0.280660094433074,1.28139149255701,0.511707249066704,0,4.45254199334973,0.771048469013278,0.710246901252508,0.0821271560138091,0.519254429183621,0.464841513839837,0,3.40860999515584,5.98526428083326,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0,0,0,0,0.509752546090077,1.66215201785745,0,0,0.261435451024901,0,0,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0.307007349452259,0,0.214840489736547,0.290033387828457,0,0,6.7766815298001,3.84380134730212,0.638063562472921,7.08104465988849,2.32422774648643,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0,0.876901770507525,0,0,0,0,0,0,0,0,1.77380532035299,1.47775344708365,0.329294892959902,0,0,0.962221127255121,4.02181365321472,3.26672954583968,0.282431402330337,2.58303223602738,8.42357378338128,7.53831261012349,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0.649243880549111,0,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0,0.586164286206121,0,0,0,0,0,0.748562161632879,0.7325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| ||
|short_description=p3@NDRG1 | |short_description=p3@NDRG1 | ||
}} | }} |
Latest revision as of 16:05, 16 September 2015
Short description: | p3@NDRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NDRG1_5end |
Coexpression cluster: | C862_renal_Urothelial_Small_Esophageal_colon_Prostate_amniotic |
Association with transcript: | -41bp_to_ENST00000522665_5end |
EntrezGene: | NDRG1 |
HGNC: | 7679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.68e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.68e-21 | 42 |
defensive cell | 3.43e-17 | 48 |
phagocyte | 3.43e-17 | 48 |
monopoietic cell | 4.36e-12 | 59 |
monocyte | 4.36e-12 | 59 |
monoblast | 4.36e-12 | 59 |
promonocyte | 4.36e-12 | 59 |
macrophage dendritic cell progenitor | 1.93e-11 | 61 |
myeloid lineage restricted progenitor cell | 5.25e-10 | 66 |
granulocyte monocyte progenitor cell | 9.53e-10 | 67 |
myeloid leukocyte | 2.36e-09 | 72 |
respiratory epithelial cell | 1.36e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-08 | 76 |
developing anatomical structure | 8.89e-08 | 581 |
embryonic structure | 1.81e-07 | 564 |
bone element | 2.16e-07 | 82 |
germ layer | 2.74e-07 | 560 |
germ layer / neural crest | 2.74e-07 | 560 |
embryonic tissue | 2.74e-07 | 560 |
presumptive structure | 2.74e-07 | 560 |
germ layer / neural crest derived structure | 2.74e-07 | 560 |
epiblast (generic) | 2.74e-07 | 560 |
embryo | 4.14e-07 | 592 |