FFCP PHASE1:Hg19::chr9:140064349..140064361,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:140064349..140064361,-
|short_description=p3@LRRC26
|description=CAGE_peak_3_at_LRRC26_5end
|association_with_transcript=65bp_to_DQ355157_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389816 | |EntrezGene=389816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31409 | |HGNC=31409 | ||
|TSSclassifier=strong | |||
|UniProt=Q2I0M4 | |UniProt=Q2I0M4 | ||
|association_with_transcript=65bp_to_DQ355157_5end | |||
|cluster_id=chr9:140064349..140064361,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_3_at_LRRC26_5end | |||
|id=chr9:140064349..140064361,- | |||
|ontology_enrichment_celltype=CL:0000784!8.63e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.25e-54;3!CL:0000451;1.76e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.51e-54,3;CL:0000451,1.85e-15,10 | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.95e-20;1!UBERON:0005754;1.56e-19;1!UBERON:0008801;2.25e-19;1!UBERON:0008425;4.28e-19;1!UBERON:0007297;1.89e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!7.53e-10!2;UBERON:0003127!1.89e-09!2;UBERON:0006562!1.33e-08!11;UBERON:0000078!8.10e-08!18;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129;UBERON:0001044!3.75e-07!6;UBERON:0003293!3.75e-07!6;UBERON:0003294!3.75e-07!6;UBERON:0010047!3.75e-07!6;UBERON:0000167!3.75e-07!6;UBERON:0003408!7.28e-07!10;UBERON:0006947!9.88e-07!3;UBERON:0004054!9.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.73e-37;2!UBERON:0001044;5.39e-28;6!UBERON:0003293;5.39e-28;6!UBERON:0003294;5.39e-28;6!UBERON:0010047;5.39e-28;6!UBERON:0003408;5.39e-28;6!UBERON:0000167;5.39e-28;6!UBERON:0006947;6.60e-25;3!UBERON:0004054;6.60e-25;3!UBERON:0001736;8.95e-20;1!UBERON:0000998;1.56e-19;1!UBERON:0006868;1.56e-19;1!UBERON:0001831;2.25e-19;1!UBERON:0001567;2.25e-19;1!UBERON:0001000;4.28e-19;1!UBERON:0005352;4.28e-19;1!UBERON:0005904;5.90e-19;4!UBERON:0001041;2.09e-12;14!UBERON:0004089;2.27e-10;2!UBERON:0002365;1.24e-09;31!UBERON:0002330;1.24e-09;31!UBERON:0000161;2.66e-09;19!UBERON:0000166;2.66e-09;19!UBERON:0004921;1.96e-08;33!UBERON:0000058;3.69e-08;10!UBERON:0003135;1.70e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.27e-37,2;UBERON:0001044,4.92e-28,6;UBERON:0003293,4.92e-28,6;UBERON:0003294,4.92e-28,6;UBERON:0010047,4.92e-28,6;UBERON:0000167,4.92e-28,6;UBERON:0006947,6.22e-25,3;UBERON:0004054,6.22e-25,3;UBERON:0001736,8.95e-20,1;UBERON:0006298,8.95e-20,1;UBERON:0000998,1.56e-19,1;UBERON:0006868,1.56e-19,1;UBERON:0001831,1.88e-19,1;UBERON:0001567,1.88e-19,1;UBERON:0008801,1.88e-19,1;UBERON:0001000,3.91e-19,1;UBERON:0005352,3.91e-19,1;UBERON:0005904,5.64e-19,4;UBERON:0003408,4.00e-17,10;UBERON:0004089,2.07e-10,2;UBERON:0002365,9.55e-10,31;UBERON:0002330,9.55e-10,31;UBERON:0000166,4.03e-08,22;UBERON:0002530,8.60e-08,59;UBERON:0003135,1.67e-07,11 | |||
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| ||
|short_description=p3@LRRC26 | |||
}} | }} |
Latest revision as of 16:10, 16 September 2015
Short description: | p3@LRRC26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC26_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 65bp_to_DQ355157_5end |
EntrezGene: | LRRC26 |
HGNC: | 31409 |
UniProt: | Q2I0M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.51e-54 | 3 |
dendritic cell | 1.85e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.27e-37 | 2 |
saliva-secreting gland | 4.92e-28 | 6 |
gland of oral region | 4.92e-28 | 6 |
gland of foregut | 4.92e-28 | 6 |
oral gland | 4.92e-28 | 6 |
oral cavity | 4.92e-28 | 6 |
male genital duct | 6.22e-25 | 3 |
internal male genitalia | 6.22e-25 | 3 |
submandibular gland | 8.95e-20 | 1 |
submandibular gland primordium | 8.95e-20 | 1 |
seminal vesicle | 1.56e-19 | 1 |
seminal fluid secreting gland | 1.56e-19 | 1 |
parotid gland | 1.88e-19 | 1 |
cheek | 1.88e-19 | 1 |
parotid gland primordium | 1.88e-19 | 1 |
vas deferens | 3.91e-19 | 1 |
spermatic cord | 3.91e-19 | 1 |
duct of male reproductive system | 5.64e-19 | 4 |
gland of gut | 4.00e-17 | 10 |
midface | 2.07e-10 | 2 |
exocrine gland | 9.55e-10 | 31 |
exocrine system | 9.55e-10 | 31 |
oral opening | 4.03e-08 | 22 |
gland | 8.60e-08 | 59 |
male reproductive organ | 1.67e-07 | 11 |