FFCP PHASE1:Hg19::chr6:1612248..1612281,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:1612248..1612281,+ to FFCP PHASE1:Hg19::chr6:1612248..1612281,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2296 | |EntrezGene=2296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3800 | |HGNC=3800 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-295bp_to_AK021858_5end | |||
|cluster_id=chr6:1612248..1612281,+ | |||
|description=CAGE_peak_2_at_FOXC1_5end | |||
|id=chr6:1612248..1612281,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.61e-13!254;CL:0000499!8.54e-11!27 | |||
|ontology_enrichment_celltype_v019=CL:0000499;8.76e-14;28!CL:0000153;1.40e-10;9!CL:0000447;1.40e-10;9!CL:0000327;1.51e-09;15!CL:0000214;4.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,4.97e-14,28;CL:0000153,1.26e-10,9;CL:0000447,1.26e-10,9;CL:0000327,1.55e-09,15;CL:0000214,4.46e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.02e-12!106;DOID:0050687!4.45e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.22e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000477!2.16e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.07e-15;8!UBERON:0000982;6.07e-15;8!UBERON:0004770;6.07e-15;8!UBERON:0011135;1.60e-09;5!UBERON:0002216;1.60e-09;5!UBERON:0011134;1.60e-09;5!UBERON:0002209;1.60e-09;5!UBERON:0002213;1.60e-09;5!UBERON:0007844;1.60e-09;5!UBERON:0011138;1.60e-09;5!UBERON:0001130;1.60e-09;5!UBERON:0001066;1.60e-09;5!UBERON:0001468;1.60e-09;5!UBERON:0001044;7.40e-08;6!UBERON:0003293;7.40e-08;6!UBERON:0003294;7.40e-08;6!UBERON:0010047;7.40e-08;6!UBERON:0003408;7.40e-08;6!UBERON:0000167;7.40e-08;6!UBERON:0006915;4.22e-07;3!UBERON:0007616;4.22e-07;3!UBERON:0002217;4.22e-07;3!UBERON:0002018;4.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.92e-15,8;UBERON:0000982,3.92e-15,8;UBERON:0004770,3.92e-15,8;UBERON:0011135,9.89e-10,5;UBERON:0002216,9.89e-10,5;UBERON:0011134,9.89e-10,5;UBERON:0002209,9.89e-10,5;UBERON:0002213,9.89e-10,5;UBERON:0005856,9.89e-10,5;UBERON:0005866,9.89e-10,5;UBERON:0005863,9.89e-10,5;UBERON:0007844,9.89e-10,5;UBERON:0011138,9.89e-10,5;UBERON:0001130,9.89e-10,5;UBERON:0001066,9.89e-10,5;UBERON:0001468,9.89e-10,5;UBERON:0001044,9.61e-08,6;UBERON:0003293,9.61e-08,6;UBERON:0003294,9.61e-08,6;UBERON:0010047,9.61e-08,6;UBERON:0000167,9.61e-08,6;UBERON:0006915,4.46e-07,3;UBERON:0007616,4.46e-07,3;UBERON:0002217,4.46e-07,3;UBERON:0002018,4.46e-07,3 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,1.05506791291381,1.60896258848061,3.31397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.383587685530591,6.86734389530676,5.51471701699479,9.55987025141436,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.263504357079378,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,1.6507082516404,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.759783069987479,0.397227542439656,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.404132016209064,0,2.57307626996383,2.30470369792,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0.150238058906597,0.340296549480063,0.89694817844431,0.427114777637135,1.05965950579781,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0.504867548488229,0.552299391853796,1.13152239773168,0.710019185033229,0,0.67824236924195,0,0,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,2.12952240071719,1.68584690078102,2.6511213287183,1.32352767278873,0.871517776369625,2.13543557199987,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,0.658501712451753,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.866198686566443,0,0.761016608938393,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.672786506072164,3.48768055066624,2.12681028880755,0,0,0,1.32969058292435,0,0,0,0.799266537048298,0.857867961948885,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.20844685094452,9.00306937907419,1.62759014219841,1.87173775377726,2.49800584316026,1.73472656537328,1.28855556491985,0,0,0,1.32845119707087,0,0.0868836144680828,2.15381273209015,1.71571711905428,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.362578348774867,0.40101294060657,0.460404944679482,0.459257792658427,0.728364672026868,0.786746489756545,1.35359883872224,0.847168708148562,1.56869953835371,0,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,2.00675909541941,1.52925763827023,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.580024309752732,0.154048617114644,0.460511024178389,0,0.214840489736547,0.435050081742686,0.255679882248303,0.801288320820636,0,0.576570202095319,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,1.28381696410176,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0.818999468447914,0.424216295861138,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0,0,0,0,3.16661452946496,3.95153871551882,0.75894634753143,1.04980416073495,0,0,0,0.0941438007767792,1.29151611801369,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.45040215981032,0,0,0.497992903438899,0,0,0,1.69338866179106,0,0,0,0.156679895773023,0,2.03150133361924,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.556812347790485,0,0.540911356951966,0,0,0.561421621224659,0.439524537815682,0.242721043499027,0,0.284136146806413,0.71623345421307,0,1.22864280839693,0,0.281338832821026,3.45056985571008,0,0.211125408127993,6.37593562403423,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,1.25314822272926,0,0.493217028184668,0,0,0,0.278304294485554,0,0.260427761085233,0,1.44999915086959,0.682760689712998,1.01701460117107,1.18193840883968,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,2.28770773389879,0.975966209950223,0.384751292518985,1.25336261431701,0,0.179515288819544,0.325942115766024,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,2.74297483886435,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0.370691816839509,1.25306339406546,0.202203398942031,0,0.234264445725339,0.91227394607833,0.5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| |phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,1.05506791291381,1.60896258848061,3.31397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.383587685530591,6.86734389530676,5.51471701699479,9.55987025141436,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.263504357079378,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,1.6507082516404,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.759783069987479,0.397227542439656,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.404132016209064,0,2.57307626996383,2.30470369792,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0.150238058906597,0.340296549480063,0.89694817844431,0.427114777637135,1.05965950579781,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0.504867548488229,0.552299391853796,1.13152239773168,0.710019185033229,0,0.67824236924195,0,0,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,2.12952240071719,1.68584690078102,2.6511213287183,1.32352767278873,0.871517776369625,2.13543557199987,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,0.658501712451753,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.866198686566443,0,0.761016608938393,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.672786506072164,3.48768055066624,2.12681028880755,0,0,0,1.32969058292435,0,0,0,0.799266537048298,0.857867961948885,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.20844685094452,9.00306937907419,1.62759014219841,1.87173775377726,2.49800584316026,1.73472656537328,1.28855556491985,0,0,0,1.32845119707087,0,0.0868836144680828,2.15381273209015,1.71571711905428,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.362578348774867,0.40101294060657,0.460404944679482,0.459257792658427,0.728364672026868,0.786746489756545,1.35359883872224,0.847168708148562,1.56869953835371,0,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,2.00675909541941,1.52925763827023,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.580024309752732,0.154048617114644,0.460511024178389,0,0.214840489736547,0.435050081742686,0.255679882248303,0.801288320820636,0,0.576570202095319,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,1.28381696410176,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0.818999468447914,0.424216295861138,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0,0,0,0,3.16661452946496,3.95153871551882,0.75894634753143,1.04980416073495,0,0,0,0.0941438007767792,1.29151611801369,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.45040215981032,0,0,0.497992903438899,0,0,0,1.69338866179106,0,0,0,0.156679895773023,0,2.03150133361924,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.556812347790485,0,0.540911356951966,0,0,0.561421621224659,0.439524537815682,0.242721043499027,0,0.284136146806413,0.71623345421307,0,1.22864280839693,0,0.281338832821026,3.45056985571008,0,0.211125408127993,6.37593562403423,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,1.25314822272926,0,0.493217028184668,0,0,0,0.278304294485554,0,0.260427761085233,0,1.44999915086959,0.682760689712998,1.01701460117107,1.18193840883968,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,2.28770773389879,0.975966209950223,0.384751292518985,1.25336261431701,0,0.179515288819544,0.325942115766024,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,2.74297483886435,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0.370691816839509,1.25306339406546,0.202203398942031,0,0.234264445725339,0.91227394607833,0.5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| ||
|short_description=p2@FOXC1 | |||
}} | }} |
Latest revision as of 16:34, 16 September 2015
Short description: | p2@FOXC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -295bp_to_AK021858_5end |
EntrezGene: | FOXC1 |
HGNC: | 3800 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 4.97e-14 | 28 |
GAG secreting cell | 1.26e-10 | 9 |
carbohydrate secreting cell | 1.26e-10 | 9 |
extracellular matrix secreting cell | 1.55e-09 | 15 |
synovial cell | 4.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.92e-15 | 8 |
skeletal joint | 3.92e-15 | 8 |
articular system | 3.92e-15 | 8 |
intervertebral cartilage | 9.89e-10 | 5 |
symphysis | 9.89e-10 | 5 |
nonsynovial joint | 9.89e-10 | 5 |
fibrous joint | 9.89e-10 | 5 |
cartilaginous joint | 9.89e-10 | 5 |
developing mesenchymal condensation | 9.89e-10 | 5 |
pre-cartilage condensation | 9.89e-10 | 5 |
cartilaginous condensation | 9.89e-10 | 5 |
cartilage element | 9.89e-10 | 5 |
post-cranial axial skeletal system | 9.89e-10 | 5 |
vertebral column | 9.89e-10 | 5 |
intervertebral disk | 9.89e-10 | 5 |
intervertebral joint | 9.89e-10 | 5 |
saliva-secreting gland | 9.61e-08 | 6 |
gland of oral region | 9.61e-08 | 6 |
gland of foregut | 9.61e-08 | 6 |
oral gland | 9.61e-08 | 6 |
oral cavity | 9.61e-08 | 6 |
stratified squamous epithelium | 4.46e-07 | 3 |
layer of synovial tissue | 4.46e-07 | 3 |
synovial joint | 4.46e-07 | 3 |
synovial membrane of synovial joint | 4.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.22e-07 | 106 |