FFCP PHASE1:Hg19::chr2:120124536..120124581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1622 | |EntrezGene=1622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2690 | |HGNC=2690 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZWD7,B8ZWD2,P07108,B8ZWD1 | |UniProt=B8ZWD7,B8ZWD2,P07108,B8ZWD1 | ||
|association_with_transcript=0bp_to_ENST00000409094,ENST00000535617,ENST00000535757,NM_001178041,NM_001178042,NM_001178043,NM_020548,uc010yyl.1,uc010yym.1,uc010yyn.1_5end | |association_with_transcript=0bp_to_ENST00000409094,ENST00000535617,ENST00000535757,NM_001178041,NM_001178042,NM_001178043,NM_020548,uc010yyl.1,uc010yym.1,uc010yyn.1_5end | ||
|cluster_id=chr2:120124536..120124581,+ | |||
|description=CAGE_peak_1_at_DBI_5end | |description=CAGE_peak_1_at_DBI_5end | ||
|id=chr2:120124536..120124581,+ | |id=chr2:120124536..120124581,+ | ||
|ontology_enrichment_celltype=CL:0000136!5.62e-08!15 | |ontology_enrichment_celltype=CL:0000136!5.62e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.19e-07;13 | |ontology_enrichment_celltype_v019=CL:0000136;1.19e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.62e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.71e-11!365;UBERON:0000062!1.07e-09!511;UBERON:0000033!1.90e-09!123;UBERON:0000481!4.52e-09!347;UBERON:0000153!1.60e-08!129;UBERON:0007811!1.60e-08!129;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.34e-07!605;UBERON:0005423!1.34e-07!605;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0004121!4.10e-07!169;UBERON:0000477!5.08e-07!286;UBERON:0000922!5.57e-07!612 | |ontology_enrichment_uberon=UBERON:0000475!8.71e-11!365;UBERON:0000062!1.07e-09!511;UBERON:0000033!1.90e-09!123;UBERON:0000481!4.52e-09!347;UBERON:0000153!1.60e-08!129;UBERON:0007811!1.60e-08!129;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.34e-07!605;UBERON:0005423!1.34e-07!605;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0004121!4.10e-07!169;UBERON:0000477!5.08e-07!286;UBERON:0000922!5.57e-07!612 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.08e-08,223;UBERON:0005423,5.16e-08,581;UBERON:0002050,7.68e-08,564;UBERON:0004121,1.35e-07,171;UBERON:0000924,1.35e-07,171;UBERON:0006601,1.35e-07,171;UBERON:0000923,3.90e-07,560;UBERON:0010316,3.90e-07,560;UBERON:0005291,3.90e-07,560;UBERON:0006598,3.90e-07,560;UBERON:0010317,3.90e-07,560;UBERON:0002532,3.90e-07,560;UBERON:0000922,9.57e-07,592 | |||
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| ||
|short_description=p1@DBI | |short_description=p1@DBI | ||
}} | }} |
Latest revision as of 16:56, 16 September 2015
Short description: | p1@DBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DBI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409094, ENST00000535617, ENST00000535757, NM_001178041, NM_001178042, NM_001178043, NM_020548, uc010yyl.1, uc010yym.1, uc010yyn.1_5end |
EntrezGene: | DBI |
HGNC: | 2690 |
UniProt: | B8ZWD7B8ZWD2P07108B8ZWD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.62e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.08e-08 | 223 |
developing anatomical structure | 5.16e-08 | 581 |
embryonic structure | 7.68e-08 | 564 |
ectoderm-derived structure | 1.35e-07 | 171 |
ectoderm | 1.35e-07 | 171 |
presumptive ectoderm | 1.35e-07 | 171 |
germ layer | 3.90e-07 | 560 |
germ layer / neural crest | 3.90e-07 | 560 |
embryonic tissue | 3.90e-07 | 560 |
presumptive structure | 3.90e-07 | 560 |
germ layer / neural crest derived structure | 3.90e-07 | 560 |
epiblast (generic) | 3.90e-07 | 560 |
embryo | 9.57e-07 | 592 |