FFCP PHASE1:Hg19::chr4:171011084..171011147,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17929 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5Z0 | |||
|association_with_transcript=0bp_to_ENST00000337664_5end | |||
|cluster_id=chr4:171011084..171011147,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_AADAT_5end | |||
|id=chr4:171011084..171011147,- | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-17!180;CL:0000057!2.24e-07!75;CL:0000133!9.19e-07!59;CL:0000333!9.22e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.13e-07;14 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.86e-21!365;UBERON:0004121!2.05e-13!169;UBERON:0000481!3.69e-13!347;UBERON:0000924!1.00e-12!173;UBERON:0006601!1.00e-12!173;UBERON:0000064!2.00e-11!219;UBERON:0000073!3.12e-11!94;UBERON:0001016!3.12e-11!94;UBERON:0000033!3.55e-11!123;UBERON:0000468!3.03e-10!659;UBERON:0000153!3.55e-10!129;UBERON:0007811!3.55e-10!129;UBERON:0003056!3.66e-10!61;UBERON:0005743!6.12e-10!86;UBERON:0000119!8.80e-10!312;UBERON:0003075!1.00e-09!86;UBERON:0007284!1.00e-09!86;UBERON:0000483!4.24e-09!309;UBERON:0002346!6.98e-09!90;UBERON:0001017!1.52e-08!82;UBERON:0000467!4.52e-08!625;UBERON:0000480!6.95e-08!626;UBERON:0000955!1.29e-07!69;UBERON:0006238!1.29e-07!69;UBERON:0000922!1.81e-07!612;UBERON:0001893!3.06e-07!34;UBERON:0002780!3.28e-07!41;UBERON:0001890!3.28e-07!41;UBERON:0006240!3.28e-07!41;UBERON:0002050!6.82e-07!605;UBERON:0005423!6.82e-07!605;UBERON:0000923!8.19e-07!604;UBERON:0005291!8.19e-07!604;UBERON:0006598!8.19e-07!604;UBERON:0002532!8.19e-07!604;UBERON:0002791!8.27e-07!33;UBERON:0001049!8.43e-07!57;UBERON:0005068!8.43e-07!57;UBERON:0006241!8.43e-07!57;UBERON:0007135!8.43e-07!57;UBERON:0005256!8.61e-07!143;UBERON:0001869!8.75e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.63e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.45e-12,171;UBERON:0000924,5.45e-12,171;UBERON:0006601,5.45e-12,171;UBERON:0003056,1.12e-10,61;UBERON:0003075,7.27e-10,82;UBERON:0007284,7.27e-10,82;UBERON:0002346,1.64e-09,86;UBERON:0010371,2.43e-09,104;UBERON:0007625,6.90e-08,11;UBERON:0001016,1.06e-07,89;UBERON:0001893,1.54e-07,34;UBERON:0000956,2.52e-07,25;UBERON:0000203,2.52e-07,25;UBERON:0000119,2.94e-07,309;UBERON:0001869,6.30e-07,32;UBERON:0002791,8.19e-07,32;UBERON:0001017,8.51e-07,81 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.563817616383885,0,0.893922188854576,0,0,1.26343974685366,1.82829939739887,2.45733936501509,0,1.74753097704138,2.11013582582763,1.8564952944007,0,1.34465029290355,0.602694528023977,1.46062018077475,0,1.35433163884467,0.816002764977012,0,1.71741592278634,1.77936752594749,1.12988375635323,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,1.00267582127178,1.15877215168659,1.5905718941022,0.486634870302636,3.30871860074237,3.32594096193846,2.72287835648691,1.30979075497713,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,1.06729878806013,0,0,0.760272105718513,0,1.10298924103761,0.81014194788176,0,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,1.98613771219828,0.286836620748814,0.709336764396714,0,0,0,1.55605517699883,0.269421344139376,0.653847612453835,0.302714855289863,1.15235184896,0.468642863667593,3.74592092196385,0.570471821544449,3.58676833324323,2.58355897016283,0.971237666208789,3.23036855415172,1.02077085627447,2.94802361548243,0.929932030581889,1.18800285728205,0,0,0,3.19838616512726,3.75355559615892,2.49357703935765,0.877955241761676,0.919463387397059,1.20190447125277,1.36118619792025,1.07633781413317,1.49490172172997,2.33125091275518,1.80054657650641,1.33968288009971,0.772921620136887,1.11670113798954,2.86919764810153,0.974370051611986,1.26216887122057,1.01254888506529,0.161646056818812,0.710019185033229,1.30977727695932,0.67824236924195,1.35282597214308,0.818238361772504,2.00763216772303,0.609868530647977,0.530119073285941,1.04574548582567,1.14027160516907,1.00928340350251,0.72995471815166,0,2.57296375277154,1.38134921352481,0,0.721879481669586,1.18306800039844,2.86593973132773,1.20505514941741,2.75734931830985,1.30727666455444,1.18635309555548,1.21348177344148,0.784885860501384,1.15424147083917,0,1.40241773803446,0.8231480226628,0,39.2940607947676,3.9313088667105,12.9973779469909,0,1.22988438543114,4.46076306776166,0.109750285408626,0,0.603173834469785,1.29623823221941,0.325808305310325,1.03993478527958,4.3299402607582,1.27523445472584,2.34817388471643,0.577465791044295,0,0.761016608938393,0.790204397959275,0,0,0,0,0,0.335964256397719,0.992425680696705,0.179117045405697,0.290633938513962,2.30029607499127,0,0,0,0,0,1.77794104018073,1.14596527667483,2.34434894420094,3.4214489204541,1.13110241973656,1.20137223137567,0.285826432630578,1.34557301214433,1.74384027533312,2.4935017179123,1.16344544182,0,2.535908257668,1.32969058292435,1.04007436911366,0.514414748524284,2.83698264046557,1.5985330740966,0.285955987316295,0,0,1.95441710576241,0,0.791951872933429,0.904318131178758,3.48613383440118,0.499864955910285,0,0,0,0.718874566474748,2.29723871668228,2.85273810081437,2.17171960001369,0.410952645100767,3.76028022803781,0,0,0,0,1.77866236955724,0,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,0.858840442033979,2.00068208423871,0.542530047399471,0,0.356857977594324,0.157702415033935,0.117141414992713,1.20378439891088,0,0,1.32845119707087,1.10621501125022,1.99832313276591,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,2.41912234663744,0.248107807818777,0.460385919864187,1.40330047216537,0.384417447767103,2.04682899626681,0.64341568457443,1.48418066444991,2.92998418225046,3.37367278094941,2.38168752440047,4.15403543346897,1.27831416305955,1.45031339509947,0.40101294060657,0.184161977871793,1.14814448164607,1.27463817604702,0.262248829918848,0.902399225814824,1.30926073077505,0.784349769176855,1.46139224653261,1.16106791782163,1.13733384070897,0,0.647747748306418,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0.895499018888713,0,0,5.64190275256056,1.31205858279882,2.27764876265012,26.0693759468737,1.37354197227515,2.31026599777646,0.574265537996172,1.30012049207304,0,1.25671933779759,1.54048617114644,1.99554777143968,1.65403886981437,1.50388342815583,1.88521702088497,3.15338521439573,0.979352392114111,0.495854746082934,0.768760269460425,0.893288987462089,0.30347334256665,0.464845549297286,0.94443704049192,0,0.924100740528266,0.532306030317022,0.869932992075073,0.9266210955196,0.858749320451947,1.86079184679834,1.2655176988749,0.190630193923825,1.27948895655667,2.1396949401696,0.318203247925937,1.56989728039846,1.2591072030832,0.823611089208164,1.88499843753098,0.606547444719948,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0.989838023675989,0,1.10273068709225,1.32687795048244,0.438450885253763,0,0.655894752046633,0.608731130888112,2.478587984798,0.281695602532241,2.00775893085672,1.27723753317057,1.07001315444375,1.41904425628239,0.633322905892992,0,0.379473173765715,0.699869440489966,0.288666338176536,0.670302275535787,0,22.6886559872038,0,0,0,0.45944680041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| |||
|short_description=p2@AADAT | |||
}} |
Latest revision as of 18:13, 16 September 2015
Short description: | p2@AADAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AADAT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000337664_5end |
EntrezGene: | AADAT |
HGNC: | 17929 |
UniProt: | Q8N5Z0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.45e-12 | 171 |
ectoderm | 5.45e-12 | 171 |
presumptive ectoderm | 5.45e-12 | 171 |
pre-chordal neural plate | 1.12e-10 | 61 |
neural plate | 7.27e-10 | 82 |
presumptive neural plate | 7.27e-10 | 82 |
neurectoderm | 1.64e-09 | 86 |
ecto-epithelium | 2.43e-09 | 104 |
pigment epithelium of eye | 6.90e-08 | 11 |
nervous system | 1.06e-07 | 89 |
telencephalon | 1.54e-07 | 34 |
cerebral cortex | 2.52e-07 | 25 |
pallium | 2.52e-07 | 25 |
cell layer | 2.94e-07 | 309 |
cerebral hemisphere | 6.30e-07 | 32 |
regional part of telencephalon | 8.19e-07 | 32 |
central nervous system | 8.51e-07 | 81 |