FFCP PHASE1:Hg19::chr4:174451350..174451363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9464 | |EntrezGene=9464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4808 | |HGNC=4808 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505300,uc010ire.1_5end | |association_with_transcript=0bp_to_ENST00000505300,uc010ire.1_5end | ||
|cluster_id=chr4:174451350..174451363,- | |||
|coexpression_cluster_id=C4394 | |coexpression_cluster_id=C4394 | ||
|description=CAGE_peak_3_at_HAND2_5end | |description=CAGE_peak_3_at_HAND2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.00e-13!180;CL:0000187!4.80e-11!54;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000393!8.94e-10!60;CL:0000211!8.94e-10!60;CL:0000183!4.62e-09!59;CL:0000057!2.40e-08!75;CL:0000359!1.14e-07!32;CL:0002494!1.39e-07!16 | |ontology_enrichment_celltype=CL:0000055!9.00e-13!180;CL:0000187!4.80e-11!54;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000393!8.94e-10!60;CL:0000211!8.94e-10!60;CL:0000183!4.62e-09!59;CL:0000057!2.40e-08!75;CL:0000359!1.14e-07!32;CL:0002494!1.39e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.01e-14;19!CL:0000333;5.95e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;6.01e-14;19!CL:0000333;5.95e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.32e-13,19;CL:0000192,6.70e-08,43;CL:0000514,6.70e-08,43;CL:0000187,5.09e-07,55;CL:0000136,7.58e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-15;24!UBERON:0007100;2.30e-13;25!UBERON:0000948;3.69e-10;22!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0000013;5.95e-07;5!UBERON:0002410;5.95e-07;5!UBERON:0000160;6.33e-07;17!UBERON:0000059;8.10e-07;11!UBERON:0000305;8.10e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-15;24!UBERON:0007100;2.30e-13;25!UBERON:0000948;3.69e-10;22!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0000013;5.95e-07;5!UBERON:0002410;5.95e-07;5!UBERON:0000160;6.33e-07;17!UBERON:0000059;8.10e-07;11!UBERON:0000305;8.10e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.85e-15,27;UBERON:0000478,9.89e-15,24;UBERON:0004872,5.55e-13,83;UBERON:0005631,2.27e-12,14;UBERON:0000158,2.27e-12,14;UBERON:0000948,1.75e-11,24;UBERON:0005498,1.75e-11,24;UBERON:0004140,1.75e-11,24;UBERON:0009881,1.75e-11,24;UBERON:0004141,1.75e-11,24;UBERON:0003084,1.75e-11,24;UBERON:0007005,1.75e-11,24;UBERON:0004139,1.75e-11,24;UBERON:0004291,1.75e-11,24;UBERON:0003914,2.93e-10,117;UBERON:0004797,2.51e-08,7;UBERON:0001009,3.33e-08,112;UBERON:0003124,1.98e-07,7;UBERON:0000013,4.43e-07,5;UBERON:0002410,4.43e-07,5;UBERON:0000160,5.31e-07,17;UBERON:0007500,5.83e-07,59;UBERON:0001981,5.83e-07,59;UBERON:0004537,5.83e-07,59;UBERON:0006965,5.83e-07,59;UBERON:0000059,6.64e-07,11;UBERON:0000926,9.40e-07,315;UBERON:0004120,9.40e-07,315;UBERON:0006603,9.40e-07,315 | |||
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| ||
|short_description=p3@HAND2 | |short_description=p3@HAND2 | ||
}} | }} |
Latest revision as of 19:33, 16 September 2015
Short description: | p3@HAND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAND2_5end |
Coexpression cluster: | C4394_neuroblastoma_Mesenchymal_rectum_heart_neuroectodermal_leiomyoma_gall |
Association with transcript: | 0bp_to_ENST00000505300, uc010ire.1_5end |
EntrezGene: | HAND2 |
HGNC: | 4808 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.32e-13 | 19 |
smooth muscle cell | 6.70e-08 | 43 |
smooth muscle myoblast | 6.70e-08 | 43 |
muscle cell | 5.09e-07 | 55 |
fat cell | 7.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.85e-15 | 27 |
extraembryonic structure | 9.89e-15 | 24 |
splanchnic layer of lateral plate mesoderm | 5.55e-13 | 83 |
extraembryonic membrane | 2.27e-12 | 14 |
membranous layer | 2.27e-12 | 14 |
heart | 1.75e-11 | 24 |
primitive heart tube | 1.75e-11 | 24 |
primary heart field | 1.75e-11 | 24 |
anterior lateral plate mesoderm | 1.75e-11 | 24 |
heart tube | 1.75e-11 | 24 |
heart primordium | 1.75e-11 | 24 |
cardiac mesoderm | 1.75e-11 | 24 |
cardiogenic plate | 1.75e-11 | 24 |
heart rudiment | 1.75e-11 | 24 |
epithelial tube | 2.93e-10 | 117 |
blood vessel layer | 2.51e-08 | 7 |
circulatory system | 3.33e-08 | 112 |
chorion | 1.98e-07 | 7 |
sympathetic nervous system | 4.43e-07 | 5 |
autonomic nervous system | 4.43e-07 | 5 |
intestine | 5.31e-07 | 17 |
epithelial tube open at both ends | 5.83e-07 | 59 |
blood vessel | 5.83e-07 | 59 |
blood vasculature | 5.83e-07 | 59 |
vascular cord | 5.83e-07 | 59 |
large intestine | 6.64e-07 | 11 |
mesoderm | 9.40e-07 | 315 |
mesoderm-derived structure | 9.40e-07 | 315 |
presumptive mesoderm | 9.40e-07 | 315 |