FFCP PHASE1:Hg19::chr1:147232729..147232730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2702 | |EntrezGene=2702 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4279 | |HGNC=4279 | ||
|TSSclassifier=strong | |||
|UniProt=P36382 | |UniProt=P36382 | ||
|association_with_transcript=-15bp_to_NM_181703,uc001eps.1_5end | |||
|cluster_id=chr1:147232729..147232730,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_9_at_GJA5_5end | |||
|id=chr1:147232729..147232730,- | |||
|ontology_enrichment_celltype=CL:0000349!2.45e-18!3;CL:0002577!2.45e-18!3;CL:0002541!8.16e-18!3;CL:0002536!5.24e-13!2;CL:0002537!7.25e-11!5;CL:0000039!4.38e-08!7;CL:0000586!4.38e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002536;1.10e-40;2!CL:0000349;1.92e-37;19!CL:0002577;1.59e-27;3!CL:0000039;2.81e-12;7!CL:0000586;2.81e-12;7!CL:0000317;3.18e-11;2!CL:1000448;3.18e-11;2!CL:0002308;3.18e-11;2!CL:0002140;3.18e-11;2!CL:0002541;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,8.98e-41,2;CL:0000349,2.32e-37,19;CL:0002577,1.82e-27,3;CL:0000039,2.98e-12,7;CL:0000586,2.98e-12,7;CL:0000317,3.02e-11,2;CL:1000448,3.02e-11,2;CL:0002308,3.02e-11,2;CL:0002140,3.02e-11,2;CL:0002541,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!8.98e-07!1;DOID:10165!8.98e-07!1;DOID:1798!8.98e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.22e-57!14;UBERON:0000158!3.22e-57!14;UBERON:0003124!8.72e-40!7;UBERON:0000478!2.24e-32!24;UBERON:0001987!9.27e-24!4;UBERON:0004340!9.27e-24!4;UBERON:0000305!1.18e-20!7;UBERON:0004871!4.75e-18!8;UBERON:0000476!8.16e-18!3;UBERON:0000920!8.16e-18!3;UBERON:0004923!9.45e-17!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.06e-32;10!UBERON:0000158;5.06e-32;10!UBERON:0000478;1.13e-29;24!UBERON:0000305;3.60e-26;7!UBERON:0001987;6.32e-21;4!UBERON:0002419;3.18e-11;2!UBERON:0007771;3.18e-11;2!UBERON:0003297;3.18e-11;2!UBERON:0001821;3.18e-11;2!UBERON:0003487;3.18e-11;2!UBERON:0001820;3.18e-11;2!UBERON:0003124;6.56e-08;3!UBERON:0000920;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-50,14;UBERON:0000158,1.25e-50,14;UBERON:0000478,1.31e-29,24;UBERON:0000305,4.10e-26,7;UBERON:0003124,4.10e-26,7;UBERON:0004871,5.97e-23,8;UBERON:0001987,7.00e-21,4;UBERON:0004340,7.00e-21,4;UBERON:0002419,3.02e-11,2;UBERON:0007771,3.02e-11,2;UBERON:0003297,3.02e-11,2;UBERON:0001821,3.02e-11,2;UBERON:0003487,3.02e-11,2;UBERON:0001820,3.02e-11,2;UBERON:0005089,3.02e-11,2;UBERON:0005088,3.02e-11,2;UBERON:0004923,9.12e-11,66;UBERON:0000920,6.78e-08,3 | |||
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|short_description=p9@GJA5 | |||
}} | }} |
Latest revision as of 19:39, 16 September 2015
Short description: | p9@GJA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GJA5_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -15bp_to_NM_181703, uc001eps.1_5end |
EntrezGene: | GJA5 |
HGNC: | 4279 |
UniProt: | P36382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 8.98e-41 | 2 |
extraembryonic cell | 2.32e-37 | 19 |
placental epithelial cell | 1.82e-27 | 3 |
germ line cell | 2.98e-12 | 7 |
germ cell | 2.98e-12 | 7 |
sebum secreting cell | 3.02e-11 | 2 |
epithelial cell of sweat gland | 3.02e-11 | 2 |
epithelial cell of skin gland | 3.02e-11 | 2 |
acinar cell of sebaceous gland | 3.02e-11 | 2 |
chorionic membrane mesenchymal stem cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-50 | 14 |
membranous layer | 1.25e-50 | 14 |
extraembryonic structure | 1.31e-29 | 24 |
amnion | 4.10e-26 | 7 |
chorion | 4.10e-26 | 7 |
somatic layer of lateral plate mesoderm | 5.97e-23 | 8 |
placenta | 7.00e-21 | 4 |
allantois | 7.00e-21 | 4 |
skin gland | 3.02e-11 | 2 |
epidermis gland | 3.02e-11 | 2 |
gland of integumental system | 3.02e-11 | 2 |
sebaceous gland | 3.02e-11 | 2 |
skin sebaceous gland | 3.02e-11 | 2 |
sweat gland | 3.02e-11 | 2 |
sweat gland placode | 3.02e-11 | 2 |
sebaceous gland placode | 3.02e-11 | 2 |
organ component layer | 9.12e-11 | 66 |
egg chorion | 6.78e-08 | 3 |