FFCP PHASE2:Hg19::chr2:28853443..28853454,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:151056 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30041 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=151056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30041 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 19:40, 16 September 2015
| Short description: | p8@PLB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_PLB1_5end |
| Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
| Association with transcript: | 0bp_to_ENST00000436775_5end |
| EntrezGene: | PLB1 |
| HGNC: | 30041 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@PLB1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 2.60e-24 | 19 |
| amnion mesenchymal stem cell | 1.44e-23 | 5 |
| amniotic epithelial cell | 1.78e-15 | 2 |
| kidney tubule cell | 2.98e-12 | 10 |
| nephron tubule epithelial cell | 2.98e-12 | 10 |
| chorionic membrane mesenchymal stem cell | 7.42e-11 | 3 |
| kidney cortical cell | 2.24e-10 | 12 |
| renal cortical epithelial cell | 2.24e-10 | 12 |
| epithelial cell of nephron | 1.71e-08 | 15 |
| kidney cell | 1.33e-07 | 17 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| amnion | 7.12e-37 | 7 |
| extraembryonic membrane | 9.65e-33 | 14 |
| membranous layer | 9.65e-33 | 14 |
| somatic layer of lateral plate mesoderm | 2.19e-32 | 8 |
| extraembryonic structure | 9.15e-30 | 24 |
| nephron tubule epithelium | 2.98e-12 | 10 |
| egg chorion | 7.42e-11 | 3 |
| cortex of kidney | 2.24e-10 | 12 |
| renal parenchyma | 2.24e-10 | 12 |
| cortex | 1.71e-08 | 15 |
Showing 1 to 10 of 20 entries
