FFCP PHASE1:Hg19::chr4:175204765..175204843,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26269 | |EntrezGene=26269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13587 | |HGNC=13587 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9Z0,D6RIC0,D6RJ92 | |UniProt=G5E9Z0,D6RIC0,D6RJ92 | ||
|association_with_transcript=0bp_to_ENST00000296517,ENST00000503293,ENST00000513696,ENST00000515664_5end | |association_with_transcript=0bp_to_ENST00000296517,ENST00000503293,ENST00000513696,ENST00000515664_5end | ||
|cluster_id=chr4:175204765..175204843,- | |||
|description=CAGE_peak_1_at_FBXO8_5end | |description=CAGE_peak_1_at_FBXO8_5end | ||
|id=chr4:175204765..175204843,- | |id=chr4:175204765..175204843,- | ||
|ontology_enrichment_celltype=CL:0000838!7.69e-11!52;CL:0000542!1.32e-10!53;CL:0000051!1.32e-10!53;CL:0000738!7.55e-09!140;CL:0000791!8.61e-09!18;CL:0000789!8.61e-09!18;CL:0002420!8.61e-09!18;CL:0002419!8.61e-09!18;CL:0000790!8.61e-09!18;CL:0002031!2.51e-07!124 | |ontology_enrichment_celltype=CL:0000838!7.69e-11!52;CL:0000542!1.32e-10!53;CL:0000051!1.32e-10!53;CL:0000738!7.55e-09!140;CL:0000791!8.61e-09!18;CL:0000789!8.61e-09!18;CL:0002420!8.61e-09!18;CL:0002419!8.61e-09!18;CL:0000790!8.61e-09!18;CL:0002031!2.51e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.00e-09;18!CL:0000789;7.00e-09;18!CL:0002419;7.00e-09;18!CL:0000542;7.27e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.69e-11,52;CL:0000542,1.32e-10,53;CL:0000051,1.32e-10,53;CL:0000738,4.27e-09,136;CL:0000791,8.61e-09,18;CL:0000789,8.61e-09,18;CL:0002420,8.61e-09,18;CL:0002419,8.61e-09,18;CL:0000790,8.61e-09,18;CL:0002031,1.48e-07,120;CL:0002087,9.38e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;7.00e-09;18!CL:0000051;7.27e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.75e-29!115;UBERON:0001049!6.52e-10!57;UBERON:0005068!6.52e-10!57;UBERON:0006241!6.52e-10!57;UBERON:0007135!6.52e-10!57;UBERON:0002616!7.20e-09!59;UBERON:0003080!1.01e-08!42;UBERON:0002780!1.88e-08!41;UBERON:0001890!1.88e-08!41;UBERON:0006240!1.88e-08!41;UBERON:0000955!2.28e-07!69;UBERON:0006238!2.28e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.66e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-28,114;UBERON:0001049,1.22e-09,56;UBERON:0005068,1.22e-09,56;UBERON:0006241,1.22e-09,56;UBERON:0007135,1.22e-09,56;UBERON:0000073,4.34e-09,53;UBERON:0002616,4.34e-09,53;UBERON:0002780,1.88e-08,41;UBERON:0001890,1.88e-08,41;UBERON:0003080,1.88e-08,41;UBERON:0006240,1.88e-08,41;UBERON:0000955,3.92e-07,68;UBERON:0006238,3.92e-07,68 | |||
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| ||
|short_description=p1@FBXO8 | |short_description=p1@FBXO8 | ||
}} | }} |
Latest revision as of 20:18, 16 September 2015
Short description: | p1@FBXO8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXO8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296517, ENST00000503293, ENST00000513696, ENST00000515664_5end |
EntrezGene: | FBXO8 |
HGNC: | 13587 |
UniProt: | G5E9Z0D6RIC0D6RJ92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.69e-11 | 52 |
lymphocyte | 1.32e-10 | 53 |
common lymphoid progenitor | 1.32e-10 | 53 |
leukocyte | 4.27e-09 | 136 |
mature alpha-beta T cell | 8.61e-09 | 18 |
alpha-beta T cell | 8.61e-09 | 18 |
immature T cell | 8.61e-09 | 18 |
mature T cell | 8.61e-09 | 18 |
immature alpha-beta T cell | 8.61e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 1.48e-07 | 120 |
nongranular leukocyte | 9.38e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-28 | 114 |
neural tube | 1.22e-09 | 56 |
neural rod | 1.22e-09 | 56 |
future spinal cord | 1.22e-09 | 56 |
neural keel | 1.22e-09 | 56 |
regional part of nervous system | 4.34e-09 | 53 |
regional part of brain | 4.34e-09 | 53 |
regional part of forebrain | 1.88e-08 | 41 |
forebrain | 1.88e-08 | 41 |
anterior neural tube | 1.88e-08 | 41 |
future forebrain | 1.88e-08 | 41 |
brain | 3.92e-07 | 68 |
future brain | 3.92e-07 | 68 |