FFCP PHASE2:Hg19::chr20:48532257..48532296,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9825 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14681 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14681 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H3K3,B4DID4,Q9UM82 | ||
|association_with_transcript=-177bp_to_ENST00000543716,NM_006038,uc002xuw.2,uc010zyn.1_5end | |association_with_transcript=-177bp_to_ENST00000543716,NM_006038,uc002xuw.2,uc010zyn.1_5end | ||
|cluster_id=chr20:48532257..48532296,- | |cluster_id=chr20:48532257..48532296,- |
Latest revision as of 20:20, 16 September 2015
Short description: | p3@SPATA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPATA2_5end |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | -177bp_to_ENST00000543716, NM_006038, uc002xuw.2, uc010zyn.1_5end |
EntrezGene: | SPATA2 |
HGNC: | 14681 |
UniProt: | F5H3K3B4DID4Q9UM82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SPATA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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granulocyte | 4.03e-15 | 8 |
blood cell | 7.41e-14 | 11 |
leukocyte | 6.01e-11 | 136 |
CD4-positive, alpha-beta T cell | 6.78e-11 | 6 |
natural killer cell | 5.04e-09 | 3 |
pro-NK cell | 5.04e-09 | 3 |
neutrophil | 1.00e-08 | 3 |
mature alpha-beta T cell | 3.03e-08 | 18 |
alpha-beta T cell | 3.03e-08 | 18 |
immature T cell | 3.03e-08 | 18 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
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regional part of forebrain | 5.14e-10 | 41 |
forebrain | 5.14e-10 | 41 |
anterior neural tube | 5.14e-10 | 41 |
future forebrain | 5.14e-10 | 41 |
cerebral hemisphere | 8.13e-09 | 32 |
pre-chordal neural plate | 2.16e-08 | 61 |
telencephalon | 3.79e-08 | 34 |
regional part of nervous system | 4.05e-08 | 53 |
regional part of brain | 4.05e-08 | 53 |
neural tube | 1.73e-07 | 56 |
Showing 1 to 10 of 18 entries