FFCP PHASE1:Hg19::chr8:143781883..143781895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54742 | |EntrezGene=54742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24225 | |HGNC=24225 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522591_5end | |association_with_transcript=0bp_to_ENST00000522591_5end | ||
|cluster_id=chr8:143781883..143781895,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_6_at_LY6K_5end | |description=CAGE_peak_6_at_LY6K_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!5.63e-09!254;CL:0002150!2.41e-08!3;CL:0000861!2.41e-08!3 | |ontology_enrichment_celltype=CL:0000066!5.63e-09!254;CL:0002150!2.41e-08!3;CL:0000861!2.41e-08!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.22e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.00e-29;29!UBERON:0000358;8.05e-09;1!UBERON:0006595;5.55e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;2.00e-29;29!UBERON:0000358;8.05e-09;1!UBERON:0006595;5.55e-07;86 | ||
|ontology_enrichment_disease=DOID:305!5.65e-18!106;DOID:0050687!3.81e-15!143;DOID:1749!1.15e-11!14;DOID:162!8.87e-08!235;DOID:4362!1.46e-07!5;DOID:14566!2.16e-07!239 | |ontology_enrichment_disease=DOID:305!5.65e-18!106;DOID:0050687!3.81e-15!143;DOID:1749!1.15e-11!14;DOID:162!8.87e-08!235;DOID:4362!1.46e-07!5;DOID:14566!2.16e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:305;2.52e-08;106!DOID:3908;8.91e-07;5 | |ontology_enrichment_disease_v019=DOID:305;2.52e-08;106!DOID:3908;8.91e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.10e-24,106;DOID:0050687,2.42e-17,143;DOID:162,3.48e-10,235;DOID:14566,6.83e-10,239;DOID:3908,8.92e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.63e-21!9;UBERON:0008947!1.11e-11!38;UBERON:0003258!1.11e-11!38;UBERON:0001557!3.65e-11!19;UBERON:0000072!2.49e-10!46;UBERON:0001004!1.78e-08!72;UBERON:0000065!2.25e-08!53;UBERON:0003729!2.68e-07!5;UBERON:0000077!3.57e-07!130;UBERON:0001007!3.97e-07!155;UBERON:0001555!3.97e-07!155;UBERON:0007026!3.97e-07!155;UBERON:0004119!4.65e-07!169;UBERON:0000925!4.65e-07!169;UBERON:0006595!4.65e-07!169;UBERON:0001041!6.34e-07!98 | |ontology_enrichment_uberon=UBERON:0001737!2.63e-21!9;UBERON:0008947!1.11e-11!38;UBERON:0003258!1.11e-11!38;UBERON:0001557!3.65e-11!19;UBERON:0000072!2.49e-10!46;UBERON:0001004!1.78e-08!72;UBERON:0000065!2.25e-08!53;UBERON:0003729!2.68e-07!5;UBERON:0000077!3.57e-07!130;UBERON:0001007!3.97e-07!155;UBERON:0001555!3.97e-07!155;UBERON:0007026!3.97e-07!155;UBERON:0004119!4.65e-07!169;UBERON:0000925!4.65e-07!169;UBERON:0006595!4.65e-07!169;UBERON:0001041!6.34e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.41e-66;9!UBERON:0001557;1.41e-66;9!UBERON:0000072;1.23e-19;37!UBERON:0000065;2.93e-15;44!UBERON:0001004;1.70e-10;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.41e-66;9!UBERON:0001557;1.41e-66;9!UBERON:0000072;1.23e-19;37!UBERON:0000065;2.93e-15;44!UBERON:0001004;1.70e-10;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.36e-66,9;UBERON:0001557,2.76e-38,19;UBERON:0008947,5.12e-22,38;UBERON:0003258,5.12e-22,38;UBERON:0000072,6.11e-21,47;UBERON:0000065,6.02e-18,54;UBERON:0001004,1.63e-12,74;UBERON:0001041,3.43e-12,87;UBERON:0004921,2.37e-11,118;UBERON:0004119,7.22e-09,160;UBERON:0000925,7.22e-09,160;UBERON:0006595,7.22e-09,160;UBERON:0001007,9.87e-09,145;UBERON:0001555,9.87e-09,145;UBERON:0007026,9.87e-09,145 | |||
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| ||
|short_description=p6@LY6K | |short_description=p6@LY6K | ||
}} | }} |
Latest revision as of 21:15, 16 September 2015
Short description: | p6@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000522591_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.22e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.36e-66 | 9 |
upper respiratory tract | 2.76e-38 | 19 |
respiratory primordium | 5.12e-22 | 38 |
endoderm of foregut | 5.12e-22 | 38 |
segment of respiratory tract | 6.11e-21 | 47 |
respiratory tract | 6.02e-18 | 54 |
respiratory system | 1.63e-12 | 74 |
foregut | 3.43e-12 | 87 |
subdivision of digestive tract | 2.37e-11 | 118 |
endoderm-derived structure | 7.22e-09 | 160 |
endoderm | 7.22e-09 | 160 |
presumptive endoderm | 7.22e-09 | 160 |
digestive system | 9.87e-09 | 145 |
digestive tract | 9.87e-09 | 145 |
primitive gut | 9.87e-09 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.10e-24 | 106 |
cell type cancer | 2.42e-17 | 143 |
cancer | 3.48e-10 | 235 |
disease of cellular proliferation | 6.83e-10 | 239 |
non-small cell lung carcinoma | 8.92e-07 | 5 |