FFCP PHASE1:Hg19::chr2:30144445..30144457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9UM73 | |UniProt=Q9UM73 | ||
|association_with_transcript=-13bp_to_ENST00000389048,uc002rmy.2_5end | |association_with_transcript=-13bp_to_ENST00000389048,uc002rmy.2_5end | ||
|cluster_id=chr2:30144445..30144457,- | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_1_at_ALK_5end | |description=CAGE_peak_1_at_ALK_5end | ||
Latest revision as of 21:37, 16 September 2015
| Short description: | p1@ALK |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ALK_5end |
| Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
| Association with transcript: | -13bp_to_ENST00000389048, uc002rmy.2_5end |
| EntrezGene: | ALK |
| HGNC: | 427 |
| UniProt: | Q9UM73 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ALK |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 7.72e-66 | 89 |
| neural tube | 1.56e-63 | 56 |
| neural rod | 1.56e-63 | 56 |
| future spinal cord | 1.56e-63 | 56 |
| neural keel | 1.56e-63 | 56 |
| regional part of forebrain | 3.06e-60 | 41 |
| forebrain | 3.06e-60 | 41 |
| anterior neural tube | 3.06e-60 | 41 |
| future forebrain | 3.06e-60 | 41 |
| central nervous system | 2.69e-58 | 81 |
Showing 1 to 10 of 74 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 1.38e-13 | 10 |
| neuroendocrine tumor | 2.38e-08 | 6 |
Showing 1 to 2 of 2 entries
