FFCP PHASE1:Hg19::chr9:2158443..2158481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALF6,B1ALG1,B1ALG2,F6XE55 | |UniProt=B1ALF6,B1ALG1,B1ALG2,F6XE55 | ||
|association_with_transcript=0bp_to_ENST00000302401,ENST00000324954,ENST00000382186,ENST00000423555,uc003zhe.2,uc003zhf.2,uc011llw.1,uc011llx.1_5end | |association_with_transcript=0bp_to_ENST00000302401,ENST00000324954,ENST00000382186,ENST00000423555,uc003zhe.2,uc003zhf.2,uc011llw.1,uc011llx.1_5end | ||
|cluster_id=chr9:2158443..2158481,+ | |||
|description=CAGE_peak_2_at_SMARCA2_5end | |description=CAGE_peak_2_at_SMARCA2_5end | ||
|id=chr9:2158443..2158481,+ | |id=chr9:2158443..2158481,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000055!2.90e-07!180 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.94e-11!115;UBERON:0000153!7.94e-11!129;UBERON:0007811!7.94e-11!129;UBERON:0000033!3.47e-10!123;UBERON:0000475!3.10e-09!365;UBERON:0004121!3.24e-08!169;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0000481!1.33e-07!347;UBERON:0000477!2.88e-07!286;UBERON:0005743!6.29e-07!86;UBERON:0001017!7.81e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.79e-11,114;UBERON:0010314,1.03e-10,132;UBERON:0004121,5.39e-09,171;UBERON:0000924,5.39e-09,171;UBERON:0006601,5.39e-09,171;UBERON:0001017,9.07e-07,81 | |||
|phase1_expression=4.72363786103447,3.63970890614671,6.62485699251064,5.00366491765652,5.81049422755474,4.36169262050184,5.06599756336621,4.42203911398782,3.13422753839806,0.737201809504527,0,0,0,3.58922423584135,3.64537113300707,3.36162573225888,3.01347264011988,3.65155045193687,6.8310591830671,4.18611597461079,1.42800483870977,0.626909442956176,5.15224776835902,3.83248390204076,2.76193807108566,5.34893840235659,5.33653831424647,5.98201937983962,0,0.383829398097213,0.309632246632152,3.67768489791571,1.8072355126695,2.21852406100073,15.1835713137391,9.66750780914466,1.76160263600908,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0.632924774881769,0.422510572623884,0.425208599930087,0.838634582033504,0.336985893439485,0,0.16072558669708,0,0,1.0959849225878,0,1.63841583378639,3.55803701545422,2.98711155796555,1.20118796110804,2.29900975981793,4.62731410949403,0.954053754535364,1.1384259382189,4.11066032559657,0,0,1.12101712596307,0.263384084775077,1.180258620683,0.786021525498329,1.02800749499755,2.17342444007882,0,0.946895611469467,0,4.34500781852177,2.06224135232386,7.3106185212595,3.24964636518019,5.89220070738106,2.47112760363769,1.47994114143309,2.48715016007264,2.31842468588042,0.296573126324121,1.07016331235885,1.04535523804977,1.92625882585863,1.14966148080576,1.03088233644789,2.78321661221453,0.637130828648193,0.651083453856419,0,0.602300476311091,0.639933055772092,1.24930726552346,0.473554504088034,0,0,0.267440195783507,0,4.87613732627923,6.70700859703636,3.96373941714944,8.31310050484502,4.01070328508712,3.33146993609895,9.54343136461319,0.973269740605272,6.05022829850034,4.65631734671384,3.86473057049755,2.61958150995425,1.09288586487763,2.59549109949101,0.97364218096405,0.522389211897802,0.398873881556595,4.05434061319081,5.14795419702115,8.54352253057999,1.39133685156694,2.58070378531837,0.694281003215189,1.13061588384802,0.838998872419812,0.550236083880135,1.46296476575767,0.516833518338658,0.71153252537342,1.33888245105868,0.805658634218294,0,0.488124115096339,0.735326160691737,3.24056779152704,3.21479021822687,2.69435247151404,2.36484109014977,1.53316637465883,0.949265659568129,1.46561395144326,0,0,2.18047026071267,3.97577561356255,5.69837302490609,12.5788721772558,7.74458876021797,4.965357350777,3.36406560085384,1.06748995729705,2.71334303258876,10.8923862389918,3.77189881795127,5.23078089963068,6.50836938873205,10.94734256512,0.234321431833797,4.68240115245481,0,2.24173020827702,2.58355897016283,1.29498355494505,0.98315564691574,8.9827835352153,1.47401180774122,5.6829179646671,4.75201142912821,2.22540236350701,0.910161361938026,0,1.68336113954066,1.62654075833553,4.43302584774693,2.19488810440419,1.22595118319608,1.65261864797256,4.76415169272088,1.97328599257748,1.70845911054854,0.847727604638247,2.10063767259082,3.60683852334536,1.54584324027377,1.30281799432113,3.54430297706659,2.14361411354637,2.77677151668526,1.93304787148829,9.37547129549109,1.06502877754984,2.72030665214629,1.86516651541536,0,1.36373060295417,1.43402297694502,0.243947412259191,0.132529768321485,0.348581828608555,0.621966330092223,0,0,0,6.43240938192885,0,1.39310378409594,3.60939740834793,1.30137480043828,0.842923450390509,1.44606617930089,1.32352767278873,1.74303555273925,1.66089433377768,1.07865046528132,1.56977172100277,2.69323009862473,0.738155454624648,0,1.6462960453256,1.47008711385542,0,0,1.77236972004421,1.7658523976586,0,3.08822058537346,9.76777540136768,1.1240175325762,4.42327478611176,18.88804281234,0.651616610620649,1.03993478527958,4.3299402607582,2.55046890945169,7.51415643109259,0.721832238805369,0.925971025153221,0.951270761172991,0,0,1.72351904261178,0.468008530278475,2.52672975890838,3.74935335947108,2.35174979478403,2.97727704209012,2.14940454486836,5.23141089325132,0,0.492663237895943,0.352193736052904,0,0.720599767084807,0.37872730027914,9.016700989488,2.29193055334967,4.68869788840188,3.4214489204541,4.93571964975953,3.60411669412701,19.7220238515099,2.13049060256185,1.30788020649984,4.8403268641827,2.84397774667111,0,0.845302752556,2.39344304926383,2.08014873822732,1.28603687131071,0,0.266422179016099,6.0050757336422,0.542621605391443,0,0.65147236858747,5.68627117988073,1.58390374586686,5.42590878707255,5.22920075160176,4.49878460319257,1.2162378064119,2.51128545716063,0,3.11512312139057,0,7.13184525203592,5.93603357337075,4.31500277355805,6.08807275015645,0.224170287987055,0.197030760201927,0,0.256686072559497,7.6228387266739,5.20559415430487,0.773288812777695,3.85287410269002,3.18969375826582,0,0,0,3.31267027641678,5.00170521059677,3.25518028439683,4.15941723061614,5.35286966391485,5.83498935625558,2.57711112983969,3.61135319673263,4.5481500811197,4.1389228517002,1.99267679560631,0.184369168541703,4.69171518127647,2.54541504701563,2.05886054286514,0.6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| ||
|short_description=p2@SMARCA2 | |short_description=p2@SMARCA2 | ||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p2@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302401, ENST00000324954, ENST00000382186, ENST00000423555, uc003zhe.2, uc003zhf.2, uc011llw.1, uc011llx.1_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | B1ALF6B1ALG1B1ALG2F6XE55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.79e-11 | 114 |
structure with developmental contribution from neural crest | 1.03e-10 | 132 |
ectoderm-derived structure | 5.39e-09 | 171 |
ectoderm | 5.39e-09 | 171 |
presumptive ectoderm | 5.39e-09 | 171 |
central nervous system | 9.07e-07 | 81 |