FFCP PHASE1:Hg19::chr9:2158443..2158481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALF6,B1ALG1,B1ALG2,F6XE55 | |UniProt=B1ALF6,B1ALG1,B1ALG2,F6XE55 | ||
|association_with_transcript=0bp_to_ENST00000302401,ENST00000324954,ENST00000382186,ENST00000423555,uc003zhe.2,uc003zhf.2,uc011llw.1,uc011llx.1_5end | |association_with_transcript=0bp_to_ENST00000302401,ENST00000324954,ENST00000382186,ENST00000423555,uc003zhe.2,uc003zhf.2,uc011llw.1,uc011llx.1_5end | ||
|cluster_id=chr9:2158443..2158481,+ | |||
|description=CAGE_peak_2_at_SMARCA2_5end | |description=CAGE_peak_2_at_SMARCA2_5end | ||
|id=chr9:2158443..2158481,+ | |id=chr9:2158443..2158481,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.90e-07!180 | |ontology_enrichment_celltype=CL:0000055!2.90e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.94e-11!115;UBERON:0000153!7.94e-11!129;UBERON:0007811!7.94e-11!129;UBERON:0000033!3.47e-10!123;UBERON:0000475!3.10e-09!365;UBERON:0004121!3.24e-08!169;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0000481!1.33e-07!347;UBERON:0000477!2.88e-07!286;UBERON:0005743!6.29e-07!86;UBERON:0001017!7.81e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!7.94e-11!115;UBERON:0000153!7.94e-11!129;UBERON:0007811!7.94e-11!129;UBERON:0000033!3.47e-10!123;UBERON:0000475!3.10e-09!365;UBERON:0004121!3.24e-08!169;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0000481!1.33e-07!347;UBERON:0000477!2.88e-07!286;UBERON:0005743!6.29e-07!86;UBERON:0001017!7.81e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.79e-11,114;UBERON:0010314,1.03e-10,132;UBERON:0004121,5.39e-09,171;UBERON:0000924,5.39e-09,171;UBERON:0006601,5.39e-09,171;UBERON:0001017,9.07e-07,81 | |||
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| ||
|short_description=p2@SMARCA2 | |short_description=p2@SMARCA2 | ||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p2@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302401, ENST00000324954, ENST00000382186, ENST00000423555, uc003zhe.2, uc003zhf.2, uc011llw.1, uc011llx.1_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | B1ALF6B1ALG1B1ALG2F6XE55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.79e-11 | 114 |
structure with developmental contribution from neural crest | 1.03e-10 | 132 |
ectoderm-derived structure | 5.39e-09 | 171 |
ectoderm | 5.39e-09 | 171 |
presumptive ectoderm | 5.39e-09 | 171 |
central nervous system | 9.07e-07 | 81 |