FFCP PHASE1:Hg19::chr12:122295487..122295505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3242 | |EntrezGene=3242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5147 | |HGNC=5147 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000542159_5end | |association_with_transcript=0bp_to_ENST00000542159_5end | ||
|cluster_id=chr12:122295487..122295505,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_HPD_5end | |description=CAGE_peak_6_at_HPD_5end | ||
|id=chr12:122295487..122295505,- | |id=chr12:122295487..122295505,- | ||
|ontology_enrichment_celltype=CL:0000181!3.32e-17!12;CL:0000417!3.32e-17!12;CL:0000668!3.32e-17!12;CL:0000414!3.32e-17!12;CL:0000412!3.32e-17!12;CL:0000182!3.32e-17!12;CL:0000319!2.10e-07!1 | |ontology_enrichment_celltype=CL:0000181!3.32e-17!12;CL:0000417!3.32e-17!12;CL:0000668!3.32e-17!12;CL:0000414!3.32e-17!12;CL:0000412!3.32e-17!12;CL:0000182!3.32e-17!12;CL:0000319!2.10e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;5.13e-23;1!CL:0000159;3.24e-12;2!CL:0000182;2.29e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.10e-23,1;CL:0000159,2.90e-12,2;CL:0000182,2.29e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.90e-09;11!UBERON:0009497;8.74e-08;13!UBERON:0003104;2.93e-07;31 | |||
|ontology_enrichment_disease=DOID:3030!2.10e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.13e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!7.00e-19!19;UBERON:0006925!7.00e-19!19;UBERON:0008836!7.00e-19!19;UBERON:0005057!7.74e-17!26;UBERON:0008835!3.85e-16!22;UBERON:0003894!3.85e-16!22;UBERON:0009854!2.19e-15!23;UBERON:0005172!2.72e-15!55;UBERON:0005173!2.72e-15!55;UBERON:0007499!4.67e-14!25;UBERON:0009497!4.67e-14!25;UBERON:0000015!4.67e-14!25;UBERON:0002423!4.67e-14!25;UBERON:0006235!4.67e-14!25;UBERON:0004161!4.67e-14!25;UBERON:0002417!1.57e-13!61;UBERON:0000916!1.57e-13!61;UBERON:0009856!1.81e-13!26;UBERON:0002365!4.25e-11!31;UBERON:0002330!4.25e-11!31;UBERON:0002368!1.09e-09!35;UBERON:0001896!1.15e-08!3;UBERON:0005290!1.15e-08!3;UBERON:0010096!1.15e-08!3;UBERON:0009569!2.01e-08!113;UBERON:0005177!9.08e-08!107;UBERON:0000949!2.88e-07!45;UBERON:0001301!4.85e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.71e-19;19!UBERON:0006925;4.71e-19;19!UBERON:0002423;1.35e-14;25!UBERON:0002365;9.68e-12;31!UBERON:0002330;9.68e-12;31!UBERON:0002368;6.40e-10;33!UBERON:0001896;1.40e-08;3!UBERON:0005290;1.40e-08;3!UBERON:0005172;2.11e-08;52!UBERON:0005173;2.11e-08;52!UBERON:0000949;3.04e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.60e-19,19;UBERON:0006925,4.60e-19,19;UBERON:0008836,4.60e-19,19;UBERON:0008835,1.57e-16,22;UBERON:0003894,1.57e-16,22;UBERON:0009854,7.82e-16,23;UBERON:0007499,1.33e-14,25;UBERON:0009497,1.33e-14,25;UBERON:0000015,1.33e-14,25;UBERON:0002423,1.33e-14,25;UBERON:0006235,1.33e-14,25;UBERON:0004161,1.33e-14,25;UBERON:0009856,4.65e-14,26;UBERON:0002365,7.36e-12,31;UBERON:0002330,7.36e-12,31;UBERON:0002368,1.50e-10,35;UBERON:0005172,2.08e-10,54;UBERON:0005173,2.08e-10,54;UBERON:0002417,2.21e-09,60;UBERON:0000916,2.21e-09,60;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0000949,2.77e-08,45;UBERON:0003929,5.92e-07,54 | |||
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|short_description=p6@HPD | |short_description=p6@HPD | ||
}} | }} |
Latest revision as of 23:11, 16 September 2015
Short description: | p6@HPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HPD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000542159_5end |
EntrezGene: | HPD |
HGNC: | 5147 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.10e-23 | 1 |
seromucus secreting cell | 2.90e-12 | 2 |
hepatocyte | 2.29e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.60e-19 | 19 |
digestive gland | 4.60e-19 | 19 |
liver bud | 4.60e-19 | 19 |
hepatic diverticulum | 1.57e-16 | 22 |
liver primordium | 1.57e-16 | 22 |
digestive tract diverticulum | 7.82e-16 | 23 |
epithelial sac | 1.33e-14 | 25 |
epithelium of foregut-midgut junction | 1.33e-14 | 25 |
anatomical boundary | 1.33e-14 | 25 |
hepatobiliary system | 1.33e-14 | 25 |
foregut-midgut junction | 1.33e-14 | 25 |
septum transversum | 1.33e-14 | 25 |
sac | 4.65e-14 | 26 |
exocrine gland | 7.36e-12 | 31 |
exocrine system | 7.36e-12 | 31 |
endocrine gland | 1.50e-10 | 35 |
abdomen element | 2.08e-10 | 54 |
abdominal segment element | 2.08e-10 | 54 |
abdominal segment of trunk | 2.21e-09 | 60 |
abdomen | 2.21e-09 | 60 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
endocrine system | 2.77e-08 | 45 |
gut epithelium | 5.92e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.10e-23 | 1 |