FFCP PHASE1:Hg19::chr10:126849588..126849614,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:126849588..126849614,- to FFCP PHASE1:Hg19::chr10:126849588..126849614,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1488 | |EntrezGene=1488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2495 | |HGNC=2495 | ||
|TSSclassifier=strong | |||
|UniProt=P56545 | |UniProt=P56545 | ||
|association_with_transcript=0bp_to_ENST00000411419_5end | |||
|cluster_id=chr10:126849588..126849614,- | |||
|description=CAGE_peak_1_at_CTBP2_5end | |||
|id=chr10:126849588..126849614,- | |||
|ontology_enrichment_celltype=CL:0000066!3.50e-28!254;CL:0002321!1.81e-20!248;CL:0000220!1.51e-19!246;CL:0000221!1.15e-10!71;CL:0000076!6.68e-10!62;CL:0000133!8.78e-09!59;CL:1000449!1.83e-07!16;CL:0002076!4.72e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.91e-28,253;CL:0002321,4.90e-21,250;CL:0000221,1.02e-10,72;CL:0000076,5.99e-10,63;CL:0000133,8.64e-09,59;CL:1000449,3.30e-07,15;CL:0002076,5.06e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.60e-07!143;DOID:14566!1.96e-07!239;DOID:162!2.35e-07!235;DOID:305!2.44e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.36e-07,239;DOID:0050687,1.45e-07,143;DOID:162,1.63e-07,235;DOID:305,2.19e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.69e-08!347;UBERON:0000468!1.82e-08!659;UBERON:0000119!2.16e-08!312;UBERON:0006554!3.70e-08!44;UBERON:0001008!5.19e-08!45;UBERON:0000483!6.70e-08!309;UBERON:0006555!1.30e-07!17;UBERON:0005103!1.30e-07!17;UBERON:0000083!1.30e-07!17;UBERON:0009201!1.30e-07!17;UBERON:0004819!1.30e-07!17;UBERON:0006553!1.30e-07!17;UBERON:0003074!1.30e-07!17;UBERON:0003060!1.30e-07!17;UBERON:0000475!1.45e-07!365;UBERON:0004211!1.83e-07!16;UBERON:0001285!1.83e-07!16;UBERON:0007684!1.83e-07!16;UBERON:0003220!1.83e-07!16;UBERON:0004208!1.83e-07!16;UBERON:0000922!1.96e-07!612;UBERON:0004876!2.98e-07!20;UBERON:0003104!4.58e-07!238;UBERON:0009142!4.58e-07!238;UBERON:0000080!5.14e-07!18;UBERON:0002120!5.14e-07!18;UBERON:0004875!5.14e-07!18;UBERON:0005721!5.14e-07!18;UBERON:0005754!5.14e-07!18;UBERON:0007297!5.14e-07!18;UBERON:0003064!8.33e-07!37;UBERON:0002113!9.82e-07!27;UBERON:0003918!9.82e-07!27;UBERON:0005095!9.82e-07!27;UBERON:0007687!9.82e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.25e-07;30!UBERON:0001008;1.25e-07;30!UBERON:0006555;3.66e-07;15!UBERON:0004819;3.66e-07;15!UBERON:0001285;3.66e-07;15!UBERON:0007684;3.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,9.74e-09,309;UBERON:0000483,3.10e-08,306;UBERON:0006554,8.80e-08,47;UBERON:0001008,1.19e-07,48;UBERON:0006555,2.36e-07,16;UBERON:0004819,2.36e-07,16;UBERON:0004211,3.30e-07,15;UBERON:0009773,3.30e-07,15;UBERON:0001231,3.30e-07,15;UBERON:0001285,3.30e-07,15;UBERON:0007684,3.30e-07,15;UBERON:0004208,3.30e-07,15 | |||
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| ||
|short_description=p1@CTBP2 | |||
}} | }} |
Latest revision as of 23:20, 16 September 2015
Short description: | p1@CTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000411419_5end |
EntrezGene: | CTBP2 |
HGNC: | 2495 |
UniProt: | P56545 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.91e-28 | 253 |
embryonic cell | 4.90e-21 | 250 |
ectodermal cell | 1.02e-10 | 72 |
squamous epithelial cell | 5.99e-10 | 63 |
neurectodermal cell | 8.64e-09 | 59 |
epithelial cell of nephron | 3.30e-07 | 15 |
endo-epithelial cell | 5.06e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cell layer | 9.74e-09 | 309 |
epithelium | 3.10e-08 | 306 |
urinary system structure | 8.80e-08 | 47 |
renal system | 1.19e-07 | 48 |
excretory tube | 2.36e-07 | 16 |
kidney epithelium | 2.36e-07 | 16 |
nephron epithelium | 3.30e-07 | 15 |
renal tubule | 3.30e-07 | 15 |
nephron tubule | 3.30e-07 | 15 |
nephron | 3.30e-07 | 15 |
uriniferous tubule | 3.30e-07 | 15 |
nephrogenic mesenchyme | 3.30e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.36e-07 | 239 |
cell type cancer | 1.45e-07 | 143 |
cancer | 1.63e-07 | 235 |
carcinoma | 2.19e-07 | 106 |