FFCP PHASE1:Hg19::chr11:17099202..17099230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6207 | |EntrezGene=6207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10386 | |HGNC=10386 | ||
|TSSclassifier=strong | |||
|UniProt=P62277 | |UniProt=P62277 | ||
|association_with_transcript=0bp_to_ENST00000228140,ENST00000525828,ENST00000527571,ENST00000528074,NM_001017,uc001mmp.2_5end | |association_with_transcript=0bp_to_ENST00000228140,ENST00000525828,ENST00000527571,ENST00000528074,NM_001017,uc001mmp.2_5end | ||
|cluster_id=chr11:17099202..17099230,- | |||
|coexpression_cluster_id=C527 | |coexpression_cluster_id=C527 | ||
|description=CAGE_peak_1_at_RPS13_5end | |description=CAGE_peak_1_at_RPS13_5end | ||
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|ontology_enrichment_celltype=CL:0002087!2.13e-24!119;CL:0002031!5.50e-23!124;CL:0000738!4.08e-21!140;CL:0000037!2.12e-19!172;CL:0000566!2.12e-19!172;CL:0002032!4.27e-18!165;CL:0000837!4.27e-18!165;CL:0000988!8.19e-18!182;CL:0000542!3.01e-17!53;CL:0000051!3.01e-17!53;CL:0000838!6.92e-17!52;CL:0000003!6.17e-13!722;CL:0002057!1.06e-12!42;CL:0000860!2.02e-12!45;CL:0000144!3.71e-12!625;CL:0000012!5.82e-12!682;CL:0002371!8.53e-11!591;CL:0000548!9.39e-11!679;CL:0000004!9.39e-11!679;CL:0000255!9.39e-11!679;CL:0000034!1.18e-10!444;CL:0000945!4.98e-10!24;CL:0000826!4.98e-10!24;CL:0000723!6.47e-09!436;CL:0000048!8.64e-09!430;CL:0000791!1.23e-08!18;CL:0000789!1.23e-08!18;CL:0002420!1.23e-08!18;CL:0002419!1.23e-08!18;CL:0000790!1.23e-08!18;CL:0002009!1.71e-08!65;CL:0002194!1.85e-08!63;CL:0000576!1.85e-08!63;CL:0000040!1.85e-08!63;CL:0000559!1.85e-08!63;CL:0000839!5.04e-08!70;CL:0000084!6.96e-08!25;CL:0000827!6.96e-08!25;CL:0000557!7.19e-08!71;CL:0000236!1.86e-07!14;CL:0000766!8.04e-07!76 | |ontology_enrichment_celltype=CL:0002087!2.13e-24!119;CL:0002031!5.50e-23!124;CL:0000738!4.08e-21!140;CL:0000037!2.12e-19!172;CL:0000566!2.12e-19!172;CL:0002032!4.27e-18!165;CL:0000837!4.27e-18!165;CL:0000988!8.19e-18!182;CL:0000542!3.01e-17!53;CL:0000051!3.01e-17!53;CL:0000838!6.92e-17!52;CL:0000003!6.17e-13!722;CL:0002057!1.06e-12!42;CL:0000860!2.02e-12!45;CL:0000144!3.71e-12!625;CL:0000012!5.82e-12!682;CL:0002371!8.53e-11!591;CL:0000548!9.39e-11!679;CL:0000004!9.39e-11!679;CL:0000255!9.39e-11!679;CL:0000034!1.18e-10!444;CL:0000945!4.98e-10!24;CL:0000826!4.98e-10!24;CL:0000723!6.47e-09!436;CL:0000048!8.64e-09!430;CL:0000791!1.23e-08!18;CL:0000789!1.23e-08!18;CL:0002420!1.23e-08!18;CL:0002419!1.23e-08!18;CL:0000790!1.23e-08!18;CL:0002009!1.71e-08!65;CL:0002194!1.85e-08!63;CL:0000576!1.85e-08!63;CL:0000040!1.85e-08!63;CL:0000559!1.85e-08!63;CL:0000839!5.04e-08!70;CL:0000084!6.96e-08!25;CL:0000827!6.96e-08!25;CL:0000557!7.19e-08!71;CL:0000236!1.86e-07!14;CL:0000766!8.04e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.83e-10;53!CL:0000945;4.98e-10;24!CL:0000860;2.12e-09;33!CL:0002057;2.12e-09;33!CL:0002087;3.13e-09;104!CL:0000791;1.25e-08;18!CL:0000789;1.25e-08;18!CL:0002419;1.25e-08;18!CL:0000576;4.59e-08;48!CL:0000084;6.96e-08;25!CL:0000236;4.21e-07;13 | |ontology_enrichment_celltype_v019=CL:0000542;2.83e-10;53!CL:0000945;4.98e-10;24!CL:0000860;2.12e-09;33!CL:0002057;2.12e-09;33!CL:0002087;3.13e-09;104!CL:0000791;1.25e-08;18!CL:0000789;1.25e-08;18!CL:0002419;1.25e-08;18!CL:0000576;4.59e-08;48!CL:0000084;6.96e-08;25!CL:0000236;4.21e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.56e-25,115;CL:0002031,1.10e-23,120;CL:0000738,1.12e-21,136;CL:0000037,8.29e-20,168;CL:0002032,1.70e-18,161;CL:0000837,1.70e-18,161;CL:0000988,2.72e-18,177;CL:0000542,3.01e-17,53;CL:0000051,3.01e-17,53;CL:0000838,6.92e-17,52;CL:0000860,1.06e-12,42;CL:0002057,1.06e-12,42;CL:0000034,2.88e-10,441;CL:0000945,4.98e-10,24;CL:0000826,4.98e-10,24;CL:0000473,2.62e-09,48;CL:0000234,2.62e-09,48;CL:0002009,5.47e-09,61;CL:0002194,5.73e-09,59;CL:0000576,5.73e-09,59;CL:0000040,5.73e-09,59;CL:0000559,5.73e-09,59;CL:0000791,1.23e-08,18;CL:0000789,1.23e-08,18;CL:0002420,1.23e-08,18;CL:0002419,1.23e-08,18;CL:0000790,1.23e-08,18;CL:0000723,1.44e-08,433;CL:0000839,1.86e-08,66;CL:0000048,1.91e-08,427;CL:0000557,2.75e-08,67;CL:0000084,6.96e-08,25;CL:0000827,6.96e-08,25;CL:0000236,1.86e-07,14;CL:0000766,3.75e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;2.83e-10;53!CL:0002057;1.65e-09;42!CL:0000790;1.25e-08;18 | |ontology_enrichment_development_v019=CL:0000051;2.83e-10;53!CL:0002057;1.65e-09;42!CL:0000790;1.25e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-07!80;UBERON:0002390!1.20e-07!102;UBERON:0003061!1.20e-07!102;UBERON:0002193!1.51e-07!112;UBERON:0001474!3.25e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!1.18e-07!80;UBERON:0002390!1.20e-07!102;UBERON:0003061!1.20e-07!102;UBERON:0002193!1.51e-07!112;UBERON:0001474!3.25e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.13e-08,93;UBERON:0004765,3.54e-08,90;UBERON:0002371,5.18e-08,76;UBERON:0002390,6.33e-08,98;UBERON:0003061,6.33e-08,98;UBERON:0002193,8.47e-08,108;UBERON:0001474,1.59e-07,82;UBERON:0001434,6.01e-07,100;UBERON:0002204,7.59e-07,167 | |||
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| ||
|short_description=p1@RPS13 | |short_description=p1@RPS13 | ||
}} | }} |
Latest revision as of 23:54, 16 September 2015
Short description: | p1@RPS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS13_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000228140, ENST00000525828, ENST00000527571, ENST00000528074, NM_001017, uc001mmp.2_5end |
EntrezGene: | RPS13 |
HGNC: | 10386 |
UniProt: | P62277 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 3.13e-08 | 93 |
skeletal element | 3.54e-08 | 90 |
bone marrow | 5.18e-08 | 76 |
hematopoietic system | 6.33e-08 | 98 |
blood island | 6.33e-08 | 98 |
hemolymphoid system | 8.47e-08 | 108 |
bone element | 1.59e-07 | 82 |
skeletal system | 6.01e-07 | 100 |
musculoskeletal system | 7.59e-07 | 167 |