FFCP PHASE1:Hg19::chr6:170863423..170863484,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:170863423..170863484,+
|short_description=p1@TBP
|description=CAGE_peak_1_at_TBP_5end
|association_with_transcript=0bp_to_ENST00000230354,ENST00000392091,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6908 | |EntrezGene=6908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11588 | |HGNC=11588 | ||
|TSSclassifier=strong | |||
|UniProt=P20226,B4DPC1 | |UniProt=P20226,B4DPC1 | ||
|association_with_transcript=0bp_to_ENST00000230354,ENST00000392091,uc003qxt.2,uc003qxu.2,uc011ehf.1_5end | |||
|cluster_id=chr6:170863423..170863484,+ | |||
|description=CAGE_peak_1_at_TBP_5end | |||
|id=chr6:170863423..170863484,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.87e-14!52;CL:0000542!3.00e-13!53;CL:0000051!3.00e-13!53;CL:0000037!1.13e-11!172;CL:0000566!1.13e-11!172;CL:0000988!6.47e-11!182;CL:0002032!2.92e-10!165;CL:0000837!2.92e-10!165;CL:0000945!1.77e-07!24;CL:0000826!1.77e-07!24;CL:0000084!7.77e-07!25;CL:0000827!7.77e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.05e-08;53!CL:0000945;2.16e-07;24!CL:0000084;6.65e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.87e-14,52;CL:0000542,3.00e-13,53;CL:0000051,3.00e-13,53;CL:0000037,1.07e-11,168;CL:0000988,2.91e-11,177;CL:0002032,2.81e-10,161;CL:0000837,2.81e-10,161;CL:0000945,1.77e-07,24;CL:0000826,1.77e-07,24;CL:0000084,7.77e-07,25;CL:0000827,7.77e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;6.05e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!4.97e-12!51;DOID:0060083!4.97e-12!51;DOID:1240!4.97e-11!39;DOID:8692!2.52e-10!31;DOID:162!3.10e-09!235;DOID:0050686!3.34e-08!137;DOID:14566!7.69e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.39e-10;31!DOID:1240;3.43e-09;39!DOID:2531;5.11e-08;51!DOID:0060083;5.11e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.97e-12,51;DOID:0060083,4.97e-12,51;DOID:1240,4.97e-11,39;DOID:8692,2.52e-10,31;DOID:162,3.10e-09,235;DOID:0050686,3.34e-08,137;DOID:14566,7.69e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TBP | |||
}} | }} |
Latest revision as of 00:12, 17 September 2015
Short description: | p1@TBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000230354, ENST00000392091, uc003qxt.2, uc003qxu.2, uc011ehf.1_5end |
EntrezGene: | TBP |
HGNC: | 11588 |
UniProt: | P20226B4DPC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.87e-14 | 52 |
lymphocyte | 3.00e-13 | 53 |
common lymphoid progenitor | 3.00e-13 | 53 |
hematopoietic stem cell | 1.07e-11 | 168 |
hematopoietic cell | 2.91e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.81e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-10 | 161 |
lymphocyte of B lineage | 1.77e-07 | 24 |
pro-B cell | 1.77e-07 | 24 |
T cell | 7.77e-07 | 25 |
pro-T cell | 7.77e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.97e-12 | 51 |
immune system cancer | 4.97e-12 | 51 |
leukemia | 4.97e-11 | 39 |
myeloid leukemia | 2.52e-10 | 31 |
cancer | 3.10e-09 | 235 |
organ system cancer | 3.34e-08 | 137 |
disease of cellular proliferation | 7.69e-08 | 239 |