FFCP PHASE1:Hg19::chr2:36582857..36582932,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:36582857..36582932,+ to FFCP PHASE1:Hg19::chr2:36582857..36582932,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51232 | |EntrezGene=51232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2359 | |HGNC=2359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV1 | |UniProt=Q9NZV1 | ||
|association_with_transcript=-136bp_to_ENST00000280527_5end | |||
|cluster_id=chr2:36582857..36582932,+ | |||
|description=CAGE_peak_1_at_CRIM1_5end | |||
|id=chr2:36582857..36582932,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.51e-27!119;CL:0000213!9.52e-18!57;CL:0000215!9.52e-18!57;CL:0000055!2.39e-16!180;CL:0000220!1.32e-15!246;CL:0002321!4.21e-15!248;CL:0000057!1.42e-13!75;CL:0002139!3.35e-13!24;CL:0002078!4.36e-13!44;CL:0000115!6.12e-12!35;CL:0000071!7.37e-10!18;CL:0002546!7.37e-10!18;CL:0000680!3.15e-09!57;CL:0000056!3.15e-09!57;CL:0000355!3.15e-09!57;CL:0000076!1.44e-08!62;CL:0000187!2.10e-08!54;CL:0000183!2.51e-08!59;CL:0000192!1.14e-07!42;CL:0000514!1.14e-07!42;CL:0002620!1.22e-07!23;CL:0000077!4.36e-07!19;CL:0000393!8.54e-07!60;CL:0000211!8.54e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.25e-13;24!CL:0000115;1.30e-10;36!CL:0000213;1.84e-10;58!CL:0000215;1.84e-10;58!CL:0000071;7.21e-10;18!CL:0002078;3.06e-09;45!CL:0002620;1.21e-07;23!CL:0000077;4.30e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.86e-27,121;CL:0000213,2.98e-18,58;CL:0000215,2.98e-18,58;CL:0002321,1.82e-15,250;CL:0000057,4.05e-14,76;CL:0002078,1.43e-13,45;CL:0002139,3.29e-13,24;CL:0000115,1.98e-12,36;CL:0000071,7.27e-10,18;CL:0002546,7.27e-10,18;CL:0000680,3.80e-09,58;CL:0000056,3.80e-09,58;CL:0000355,3.80e-09,58;CL:0000076,8.63e-09,63;CL:0000187,2.50e-08,55;CL:0002620,1.21e-07,23;CL:0000192,1.41e-07,43;CL:0000514,1.41e-07,43;CL:0000077,4.33e-07,19;CL:0000393,9.52e-07,61;CL:0000211,9.52e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;7.21e-10;18!CL:0000222;5.63e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.18e-21!79;UBERON:0007798!5.18e-21!79;UBERON:0004872!6.59e-20!84;UBERON:0000055!7.85e-20!69;UBERON:0000468!1.05e-19!659;UBERON:0000119!8.01e-19!312;UBERON:0003914!9.55e-19!118;UBERON:0000483!1.40e-18!309;UBERON:0000467!5.21e-18!625;UBERON:0001981!1.13e-17!60;UBERON:0007500!1.13e-17!60;UBERON:0004537!1.13e-17!60;UBERON:0006965!1.13e-17!60;UBERON:0000480!1.38e-17!626;UBERON:0000475!9.20e-17!365;UBERON:0000477!2.31e-16!286;UBERON:0000490!1.56e-15!138;UBERON:0002100!4.70e-15!216;UBERON:0000481!8.08e-15!347;UBERON:0001009!9.71e-15!113;UBERON:0004535!2.22e-14!110;UBERON:0004111!2.38e-14!241;UBERON:0005256!2.99e-14!143;UBERON:0003104!4.84e-12!238;UBERON:0009142!4.84e-12!238;UBERON:0000025!1.47e-11!194;UBERON:0000914!1.75e-11!83;UBERON:0002329!1.75e-11!83;UBERON:0003077!1.75e-11!83;UBERON:0003059!1.75e-11!83;UBERON:0007282!1.75e-11!83;UBERON:0009618!1.75e-11!83;UBERON:0007285!1.75e-11!83;UBERON:0001637!7.13e-11!42;UBERON:0003509!7.13e-11!42;UBERON:0004572!7.13e-11!42;UBERON:0004290!2.74e-10!70;UBERON:0000486!5.08e-10!82;UBERON:0001986!7.37e-10!18;UBERON:0004638!7.37e-10!18;UBERON:0004852!7.37e-10!18;UBERON:0000487!1.39e-09!22;UBERON:0006914!1.77e-09!25;UBERON:0001134!2.37e-09!61;UBERON:0002036!2.37e-09!61;UBERON:0003082!2.37e-09!61;UBERON:0002385!2.72e-09!63;UBERON:0001015!2.72e-09!63;UBERON:0000383!2.72e-09!63;UBERON:0000064!2.85e-09!219;UBERON:0004923!5.93e-09!57;UBERON:0002050!7.44e-09!605;UBERON:0005423!7.44e-09!605;UBERON:0000923!7.44e-09!604;UBERON:0005291!7.44e-09!604;UBERON:0006598!7.44e-09!604;UBERON:0002532!7.44e-09!604;UBERON:0004573!9.77e-09!33;UBERON:0004571!9.77e-09!33;UBERON:0000922!2.36e-08!612;UBERON:0000926!9.40e-08!448;UBERON:0004120!9.40e-08!448;UBERON:0006603!9.40e-08!448;UBERON:0000062!6.12e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;5.51e-10;65!UBERON:0004638;7.21e-10;18!UBERON:0001986;7.21e-10;18!UBERON:0004852;7.21e-10;18!UBERON:0000487;1.36e-09;22!UBERON:0007500;1.59e-09;56!UBERON:0001981;1.59e-09;56!UBERON:0004537;1.59e-09;56!UBERON:0006914;1.77e-09;25!UBERON:0001637;7.67e-09;42!UBERON:0003509;7.67e-09;42!UBERON:0004572;7.67e-09;42!UBERON:0002049;9.73e-09;75!UBERON:0007798;9.73e-09;75!UBERON:0003914;1.25e-08;74!UBERON:0004573;2.09e-08;33!UBERON:0004571;2.09e-08;33!UBERON:0000490;5.85e-08;33 | |||
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| ||
|short_description=p1@CRIM1 | |||
}} | }} |
Latest revision as of 00:54, 17 September 2015
Short description: | p1@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -136bp_to_ENST00000280527_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | Q9NZV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.86e-27 | 121 |
lining cell | 2.98e-18 | 58 |
barrier cell | 2.98e-18 | 58 |
embryonic cell | 1.82e-15 | 250 |
fibroblast | 4.05e-14 | 76 |
meso-epithelial cell | 1.43e-13 | 45 |
endothelial cell of vascular tree | 3.29e-13 | 24 |
endothelial cell | 1.98e-12 | 36 |
blood vessel endothelial cell | 7.27e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.27e-10 | 18 |
muscle precursor cell | 3.80e-09 | 58 |
myoblast | 3.80e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.80e-09 | 58 |
squamous epithelial cell | 8.63e-09 | 63 |
muscle cell | 2.50e-08 | 55 |
skin fibroblast | 1.21e-07 | 23 |
smooth muscle cell | 1.41e-07 | 43 |
smooth muscle myoblast | 1.41e-07 | 43 |
mesothelial cell | 4.33e-07 | 19 |
electrically responsive cell | 9.52e-07 | 61 |
electrically active cell | 9.52e-07 | 61 |