FFCP PHASE1:Hg19::chr2:36706518..36706529,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51232 | |EntrezGene=51232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2359 | |HGNC=2359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-156bp_to_ENST00000481321_5end | |association_with_transcript=-156bp_to_ENST00000481321_5end | ||
|cluster_id=chr2:36706518..36706529,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_27_at_CRIM1_5end | |description=CAGE_peak_27_at_CRIM1_5end | ||
|id=chr2:36706518..36706529,+ | |id=chr2:36706518..36706529,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.63e-39!42;CL:0000860!4.29e-36!45;CL:0000839!6.66e-28!70;CL:0000763!9.84e-28!112;CL:0000049!9.84e-28!112;CL:0002194!2.73e-26!63;CL:0000576!2.73e-26!63;CL:0000040!2.73e-26!63;CL:0000559!2.73e-26!63;CL:0000766!2.48e-25!76;CL:0002009!2.53e-25!65;CL:0000557!9.54e-23!71;CL:0002032!1.15e-20!165;CL:0000837!1.15e-20!165;CL:0000037!1.67e-19!172;CL:0000566!1.67e-19!172;CL:0000988!5.37e-18!182;CL:0002031!1.65e-17!124;CL:0002087!1.75e-15!119;CL:0000738!8.07e-15!140;CL:0000134!3.25e-09!358;CL:0002320!7.21e-09!365;CL:0000764!8.50e-09!2;CL:0000765!8.50e-09!2;CL:0000050!8.50e-09!2;CL:0000038!8.50e-09!2;CL:0000558!8.50e-09!2;CL:0000547!8.50e-09!2;CL:0000549!8.50e-09!2;CL:0000550!8.50e-09!2;CL:0000552!8.50e-09!2;CL:0000219!2.61e-08!390;CL:0000048!2.06e-07!430;CL:0000723!3.48e-07!436;CL:0000034!6.84e-07!444 | |ontology_enrichment_celltype=CL:0002057!4.63e-39!42;CL:0000860!4.29e-36!45;CL:0000839!6.66e-28!70;CL:0000763!9.84e-28!112;CL:0000049!9.84e-28!112;CL:0002194!2.73e-26!63;CL:0000576!2.73e-26!63;CL:0000040!2.73e-26!63;CL:0000559!2.73e-26!63;CL:0000766!2.48e-25!76;CL:0002009!2.53e-25!65;CL:0000557!9.54e-23!71;CL:0002032!1.15e-20!165;CL:0000837!1.15e-20!165;CL:0000037!1.67e-19!172;CL:0000566!1.67e-19!172;CL:0000988!5.37e-18!182;CL:0002031!1.65e-17!124;CL:0002087!1.75e-15!119;CL:0000738!8.07e-15!140;CL:0000134!3.25e-09!358;CL:0002320!7.21e-09!365;CL:0000764!8.50e-09!2;CL:0000765!8.50e-09!2;CL:0000050!8.50e-09!2;CL:0000038!8.50e-09!2;CL:0000558!8.50e-09!2;CL:0000547!8.50e-09!2;CL:0000549!8.50e-09!2;CL:0000550!8.50e-09!2;CL:0000552!8.50e-09!2;CL:0000219!2.61e-08!390;CL:0000048!2.06e-07!430;CL:0000723!3.48e-07!436;CL:0000034!6.84e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-53;33!CL:0002057;1.94e-53;33!CL:0000473;3.82e-36;39!CL:0000234;3.82e-36;39!CL:0000576;2.59e-24;48!CL:0000766;3.82e-17;69!CL:0002087;6.18e-09;104!CL:0000763;8.51e-08;100!CL:0000738;6.64e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-46,42;CL:0002057,1.65e-46,42;CL:0000473,1.12e-40,48;CL:0000234,1.12e-40,48;CL:0002194,1.68e-32,59;CL:0000576,1.68e-32,59;CL:0000040,1.68e-32,59;CL:0000559,1.68e-32,59;CL:0002009,1.91e-31,61;CL:0000839,4.41e-29,66;CL:0000557,1.19e-28,67;CL:0000766,1.14e-26,72;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-37;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-21!80;UBERON:0001474!8.68e-20!86;UBERON:0002405!3.18e-16!115;UBERON:0004765!4.93e-16!101;UBERON:0001434!4.93e-16!101;UBERON:0002390!8.01e-16!102;UBERON:0003061!8.01e-16!102;UBERON:0002193!2.47e-15!112;UBERON:0002384!4.11e-09!375;UBERON:0002204!1.95e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-25,76;UBERON:0001474,2.01e-23,82;UBERON:0004765,2.46e-21,90;UBERON:0002405,1.21e-20,93;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001434,3.44e-19,100;UBERON:0002193,9.38e-18,108;UBERON:0002204,2.30e-11,167;UBERON:0003081,2.88e-09,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,1.39457422143411,1.23350366406548,0.619412741790207,0.575384784644301,0,0.709446689665756,0.689491361473237,1.93645405075148,0,0.376484679085209,0.272906150057846,0.674170453335254,0.306083892370903,1.60464513538047,0.639337125799041,0,0,0,3.77272010217159,6.80862269629368,4.35975574296902,0.251248665256743,0.521482918420201,0,4.84319602106695,9.57521853567668,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,1.39457422143411,1.23350366406548,0.619412741790207,0.575384784644301,0,0.709446689665756,0.689491361473237,1.93645405075148,0,0.376484679085209,0.272906150057846,0.674170453335254,0.306083892370903,1.60464513538047,0.639337125799041,0,0,0,3.77272010217159,6.80862269629368,4.35975574296902,0.251248665256743,0.521482918420201,0,4.84319602106695,9.57521853567668,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@CRIM1 | |short_description=p27@CRIM1 | ||
}} | }} |
Latest revision as of 01:06, 17 September 2015
Short description: | p27@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_CRIM1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -156bp_to_ENST00000481321_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-46 | 42 |
defensive cell | 1.12e-40 | 48 |
phagocyte | 1.12e-40 | 48 |
monopoietic cell | 1.68e-32 | 59 |
monocyte | 1.68e-32 | 59 |
monoblast | 1.68e-32 | 59 |
promonocyte | 1.68e-32 | 59 |
macrophage dendritic cell progenitor | 1.91e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.41e-29 | 66 |
granulocyte monocyte progenitor cell | 1.19e-28 | 67 |
myeloid leukocyte | 1.14e-26 | 72 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-25 | 76 |
bone element | 2.01e-23 | 82 |
skeletal element | 2.46e-21 | 90 |
immune system | 1.21e-20 | 93 |
hematopoietic system | 1.39e-19 | 98 |
blood island | 1.39e-19 | 98 |
skeletal system | 3.44e-19 | 100 |
hemolymphoid system | 9.38e-18 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
lateral plate mesoderm | 2.88e-09 | 203 |