FFCP PHASE1:Hg19::chr2:36777389..36777403,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2359 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-370bp_to_AK026159_5end | |||
|cluster_id=chr2:36777389..36777403,+ | |||
|description=CAGE_peak_2_at_CRIM1_5end | |||
|id=chr2:36777389..36777403,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.75e-22!119;CL:0000220!1.97e-17!246;CL:0002321!5.95e-17!248;CL:0000055!8.43e-15!180;CL:0000213!8.52e-13!57;CL:0000215!8.52e-13!57;CL:0000066!2.28e-12!254;CL:0000057!4.62e-11!75;CL:0000680!3.65e-09!57;CL:0000056!3.65e-09!57;CL:0000355!3.65e-09!57;CL:0000077!5.44e-09!19;CL:0000192!1.65e-08!42;CL:0000514!1.65e-08!42;CL:0000076!2.03e-08!62;CL:0000187!3.91e-08!54;CL:0000183!9.69e-08!59;CL:0002139!1.01e-07!24;CL:0000393!3.12e-07!60;CL:0000211!3.12e-07!60;CL:0002078!4.36e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.46e-09;19!CL:0002139;3.87e-08;24!CL:0000213;3.23e-07;58!CL:0000215;3.23e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.10e-22,121;CL:0002321,2.75e-16,250;CL:0000213,2.23e-13,58;CL:0000215,2.23e-13,58;CL:0000057,1.31e-11,76;CL:0000066,5.91e-11,253;CL:0000680,2.95e-09,58;CL:0000056,2.95e-09,58;CL:0000355,2.95e-09,58;CL:0000077,3.43e-09,19;CL:0000076,9.60e-09,63;CL:0000192,2.35e-08,43;CL:0000514,2.35e-08,43;CL:0000187,3.28e-08,55;CL:0002139,5.15e-08,24;CL:0002078,1.73e-07,45;CL:0000393,2.62e-07,61;CL:0000211,2.62e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000222;9.22e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000055;4.39e-07;65!UBERON:0001637;4.61e-07;42!UBERON:0003509;4.61e-07;42!UBERON:0004572;4.61e-07;42!UBERON:0002049;5.43e-07;75!UBERON:0007798;5.43e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.60e-14,78;UBERON:0007798,6.60e-14,78;UBERON:0000490,2.64e-13,148;UBERON:0000119,4.53e-13,309;UBERON:0000483,5.85e-13,306;UBERON:0003914,1.31e-12,117;UBERON:0000055,2.99e-12,68;UBERON:0003104,5.44e-12,160;UBERON:0009142,5.44e-12,160;UBERON:0004872,9.01e-12,83;UBERON:0002100,5.59e-11,199;UBERON:0007500,8.79e-11,59;UBERON:0001981,8.79e-11,59;UBERON:0004537,8.79e-11,59;UBERON:0006965,8.79e-11,59;UBERON:0005256,1.72e-10,122;UBERON:0000486,2.26e-09,83;UBERON:0001637,1.57e-08,42;UBERON:0003509,1.57e-08,42;UBERON:0004572,1.57e-08,42;UBERON:0007503,1.79e-08,78;UBERON:0007524,2.01e-08,73;UBERON:0004923,2.58e-08,66;UBERON:0004535,2.83e-08,109;UBERON:0001134,3.06e-08,62;UBERON:0002036,3.06e-08,62;UBERON:0003082,3.06e-08,62;UBERON:0004111,3.22e-08,240;UBERON:0002329,4.01e-08,71;UBERON:0003059,4.01e-08,71;UBERON:0007282,4.01e-08,71;UBERON:0004290,4.01e-08,71;UBERON:0009618,4.01e-08,71;UBERON:0003077,4.66e-08,72;UBERON:0007285,4.66e-08,72;UBERON:0002385,5.57e-08,64;UBERON:0001015,5.57e-08,64;UBERON:0000383,5.57e-08,64;UBERON:0001009,6.63e-08,112;UBERON:0003102,3.90e-07,99 | |||
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| |||
|short_description=p2@CRIM1 | |||
}} |
Latest revision as of 01:21, 17 September 2015
Short description: | p2@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -370bp_to_AK026159_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.10e-22 | 121 |
embryonic cell | 2.75e-16 | 250 |
lining cell | 2.23e-13 | 58 |
barrier cell | 2.23e-13 | 58 |
fibroblast | 1.31e-11 | 76 |
epithelial cell | 5.91e-11 | 253 |
muscle precursor cell | 2.95e-09 | 58 |
myoblast | 2.95e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.95e-09 | 58 |
mesothelial cell | 3.43e-09 | 19 |
squamous epithelial cell | 9.60e-09 | 63 |
smooth muscle cell | 2.35e-08 | 43 |
smooth muscle myoblast | 2.35e-08 | 43 |
muscle cell | 3.28e-08 | 55 |
endothelial cell of vascular tree | 5.15e-08 | 24 |
meso-epithelial cell | 1.73e-07 | 45 |
electrically responsive cell | 2.62e-07 | 61 |
electrically active cell | 2.62e-07 | 61 |