FFCP PHASE1:Hg19::chr10:129845893..129845905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479896,ENST00000495530_5end | |association_with_transcript=0bp_to_ENST00000479896,ENST00000495530_5end | ||
|cluster_id=chr10:129845893..129845905,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_PTPRE_5end | |description=CAGE_peak_4_at_PTPRE_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000860;3.09e-39;33!CL:0002057;3.09e-39;33!CL:0000473;8.60e-38;39!CL:0000234;8.60e-38;39!CL:0000576;4.15e-28;48!CL:0000766;3.01e-24;69!CL:0002087;3.97e-15;104!CL:0000738;5.11e-13;136!CL:0000763;2.31e-12;100!CL:0000094;2.44e-12;8!CL:0000988;3.46e-09;177!CL:0002393;4.11e-09;6!CL:0002397;4.11e-09;6!CL:0000081;2.42e-08;11!CL:0000791;7.23e-08;18!CL:0000789;7.23e-08;18!CL:0002419;7.23e-08;18!CL:0000084;1.10e-07;25!CL:0000235;2.25e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;3.09e-39;33!CL:0002057;3.09e-39;33!CL:0000473;8.60e-38;39!CL:0000234;8.60e-38;39!CL:0000576;4.15e-28;48!CL:0000766;3.01e-24;69!CL:0002087;3.97e-15;104!CL:0000738;5.11e-13;136!CL:0000763;2.31e-12;100!CL:0000094;2.44e-12;8!CL:0000988;3.46e-09;177!CL:0002393;4.11e-09;6!CL:0002397;4.11e-09;6!CL:0000081;2.42e-08;11!CL:0000791;7.23e-08;18!CL:0000789;7.23e-08;18!CL:0002419;7.23e-08;18!CL:0000084;1.10e-07;25!CL:0000235;2.25e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.77e-62,136;CL:0000473,3.74e-60,48;CL:0000234,3.74e-60,48;CL:0000766,6.90e-59,72;CL:0002087,1.35e-55,115;CL:0000860,4.32e-54,42;CL:0002057,4.32e-54,42;CL:0000037,7.17e-54,168;CL:0002194,1.02e-53,59;CL:0000576,1.02e-53,59;CL:0000040,1.02e-53,59;CL:0000559,1.02e-53,59;CL:0002009,1.09e-53,61;CL:0000988,1.79e-49,177;CL:0000557,2.96e-49,67;CL:0002031,1.02e-48,120;CL:0002032,2.54e-48,161;CL:0000837,2.54e-48,161;CL:0000839,5.53e-46,66;CL:0000763,8.45e-42,108;CL:0000049,8.45e-42,108;CL:0000134,3.33e-13,354;CL:0002320,2.11e-12,361;CL:0000094,2.42e-12,8;CL:0002393,3.54e-12,9;CL:0002397,3.54e-12,9;CL:0000219,5.04e-10,386;CL:0000081,2.41e-08,11;CL:0000791,4.54e-08,18;CL:0000789,4.54e-08,18;CL:0002420,4.54e-08,18;CL:0002419,4.54e-08,18;CL:0000790,4.54e-08,18;CL:0000034,6.58e-08,441;CL:0000084,7.99e-08,25;CL:0000827,7.99e-08,25;CL:0000838,1.24e-07,52;CL:0000542,2.28e-07,53;CL:0000051,2.28e-07,53;CL:0000723,2.42e-07,433;CL:0000235,2.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-38;42!CL:0000049;9.06e-13;108!CL:0000790;7.23e-08;18 | |ontology_enrichment_development_v019=CL:0002057;1.15e-38;42!CL:0000049;9.06e-13;108!CL:0000790;7.23e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.51e-41!102;UBERON:0003061!7.51e-41!102;UBERON:0002193!1.59e-36!112;UBERON:0002371!6.48e-32!80;UBERON:0001474!2.25e-27!86;UBERON:0004765!9.43e-23!101;UBERON:0001434!9.43e-23!101;UBERON:0002405!1.57e-22!115;UBERON:0003081!4.68e-09!216;UBERON:0000178!6.57e-07!15;UBERON:0000179!6.57e-07!15;UBERON:0000463!6.57e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!7.51e-41!102;UBERON:0003061!7.51e-41!102;UBERON:0002193!1.59e-36!112;UBERON:0002371!6.48e-32!80;UBERON:0001474!2.25e-27!86;UBERON:0004765!9.43e-23!101;UBERON:0001434!9.43e-23!101;UBERON:0002405!1.57e-22!115;UBERON:0003081!4.68e-09!216;UBERON:0000178!6.57e-07!15;UBERON:0000179!6.57e-07!15;UBERON:0000463!6.57e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-10;15!UBERON:0000179;1.60e-10;15!UBERON:0000463;1.60e-10;15!UBERON:0002390;1.48e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-10;15!UBERON:0000179;1.60e-10;15!UBERON:0000463;1.60e-10;15!UBERON:0002390;1.48e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.10e-57,98;UBERON:0003061,6.10e-57,98;UBERON:0002193,8.70e-51,108;UBERON:0002371,1.61e-44,76;UBERON:0002405,1.09e-40,93;UBERON:0001474,8.94e-40,82;UBERON:0004765,1.50e-38,90;UBERON:0001434,1.28e-32,100;UBERON:0003081,5.94e-17,203;UBERON:0002204,5.77e-12,167;UBERON:0002384,9.22e-12,371;UBERON:0000178,1.61e-10,15;UBERON:0000179,1.61e-10,15;UBERON:0000463,1.61e-10,15 | |||
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|short_description=p4@PTPRE | |short_description=p4@PTPRE | ||
}} | }} |
Latest revision as of 01:49, 17 September 2015
Short description: | p4@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000479896, ENST00000495530_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.10e-57 | 98 |
blood island | 6.10e-57 | 98 |
hemolymphoid system | 8.70e-51 | 108 |
bone marrow | 1.61e-44 | 76 |
immune system | 1.09e-40 | 93 |
bone element | 8.94e-40 | 82 |
skeletal element | 1.50e-38 | 90 |
skeletal system | 1.28e-32 | 100 |
lateral plate mesoderm | 5.94e-17 | 203 |
musculoskeletal system | 5.77e-12 | 167 |
connective tissue | 9.22e-12 | 371 |
blood | 1.61e-10 | 15 |
haemolymphatic fluid | 1.61e-10 | 15 |
organism substance | 1.61e-10 | 15 |