FFCP PHASE1:Hg19::chr11:1856186..1856232,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1856186..1856232,+
|short_description=p1@SYT8
|description=CAGE_peak_1_at_SYT8_5end
|association_with_transcript=0bp_to_ENST00000424556_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBL4 | |UniProt=F8WBL4 | ||
|association_with_transcript=0bp_to_ENST00000424556_5end | |||
|cluster_id=chr11:1856186..1856232,+ | |||
|coexpression_cluster_id=C1138 | |||
|description=CAGE_peak_1_at_SYT8_5end | |||
|id=chr11:1856186..1856232,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.21e-20!43;CL:0000223!1.80e-16!59;CL:0002368!9.24e-12!13;CL:0000066!3.20e-10!254;CL:0002251!6.30e-09!21;CL:0002202!6.24e-07!9;CL:0002632!6.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.21e-18;13!CL:0002076;6.11e-18;42!CL:0002251;7.26e-12;20!CL:0000244;1.90e-10;4!CL:0000731;1.90e-10;4!CL:0002202;2.22e-09;9!CL:0002632;2.22e-09;9!CL:0002623;2.90e-09;3!CL:0002328;3.29e-08;3!CL:0002327;1.56e-07;4!CL:0000575;8.72e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.19e-25,42;CL:0000223,2.45e-18,58;CL:0002368,4.64e-18,13;CL:0002251,7.13e-12,20;CL:0000244,2.00e-10,4;CL:0000731,2.00e-10,4;CL:0002202,2.33e-09,9;CL:0002632,2.33e-09,9;CL:0002623,2.99e-09,3;CL:0000066,3.04e-09,253;CL:0002328,3.17e-08,3;CL:0002327,1.56e-07,4;CL:0000575,8.84e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;7.91e-10;58!UBERON:0008814;5.96e-07;2!UBERON:0010056;5.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.12e-20!169;UBERON:0000925!1.12e-20!169;UBERON:0006595!1.12e-20!169;UBERON:0000161!1.22e-16!35;UBERON:0001004!5.79e-16!72;UBERON:0001007!8.66e-16!155;UBERON:0001555!8.66e-16!155;UBERON:0007026!8.66e-16!155;UBERON:0004921!1.64e-15!129;UBERON:0004185!1.64e-15!129;UBERON:0000077!3.60e-14!130;UBERON:0005153!3.55e-12!37;UBERON:0000166!2.46e-11!21;UBERON:0001041!2.75e-11!98;UBERON:0000065!3.28e-11!53;UBERON:0005911!1.85e-10!82;UBERON:0005157!3.96e-10!51;UBERON:0005178!1.98e-09!34;UBERON:0002224!1.98e-09!34;UBERON:0001044!2.40e-09!6;UBERON:0003293!2.40e-09!6;UBERON:0003294!2.40e-09!6;UBERON:0010047!2.40e-09!6;UBERON:0000167!2.40e-09!6;UBERON:0005181!5.23e-09!35;UBERON:0000165!1.07e-08!28;UBERON:0000930!1.07e-08!28;UBERON:0001444!2.38e-08!48;UBERON:0003408!6.82e-08!10;UBERON:0000466!1.48e-07!126;UBERON:0000464!1.59e-07!104;UBERON:0000365!5.32e-07!5;UBERON:0000078!6.89e-07!18;UBERON:0000162!8.51e-07!14;UBERON:0001353!8.51e-07!14;UBERON:0000163!8.51e-07!14;UBERON:0006866!8.51e-07!14;UBERON:0000164!8.51e-07!14;UBERON:0000931!8.51e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.10e-16;6!UBERON:0003293;3.10e-16;6!UBERON:0003294;3.10e-16;6!UBERON:0010047;3.10e-16;6!UBERON:0003408;3.10e-16;6!UBERON:0000167;3.10e-16;6!UBERON:0000165;6.36e-16;28!UBERON:0000161;2.65e-15;19!UBERON:0000166;2.65e-15;19!UBERON:0000974;1.11e-11;6!UBERON:0001041;1.50e-11;14!UBERON:0001723;2.00e-09;3!UBERON:0001033;2.00e-09;3!UBERON:0007196;2.86e-09;15!UBERON:0001558;2.86e-09;15!UBERON:0000058;3.88e-09;10!UBERON:0007811;1.29e-08;52!UBERON:0006947;1.75e-08;3!UBERON:0004054;1.75e-08;3!UBERON:0000365;2.31e-08;5!UBERON:0004815;3.29e-08;3!UBERON:0002031;3.29e-08;3!UBERON:0001004;4.74e-08;65!UBERON:0004921;1.27e-07;33!UBERON:0001911;1.56e-07;4!UBERON:0000153;2.97e-07;54!UBERON:0005178;3.26e-07;34!UBERON:0002224;3.26e-07;34!UBERON:0003343;3.91e-07;4!UBERON:0004785;3.91e-07;4!UBERON:0000033;5.15e-07;50!UBERON:0005910;5.72e-07;6!UBERON:0002294;6.36e-07;7!UBERON:0001173;6.36e-07;7!UBERON:0005181;6.72e-07;35!UBERON:0001555;7.81e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.12e-19,160;UBERON:0000925,3.12e-19,160;UBERON:0006595,3.12e-19,160;UBERON:0001004,1.00e-18,74;UBERON:0000166,2.32e-18,22;UBERON:0001044,2.98e-16,6;UBERON:0003293,2.98e-16,6;UBERON:0003294,2.98e-16,6;UBERON:0010047,2.98e-16,6;UBERON:0000167,2.98e-16,6;UBERON:0000161,1.81e-15,36;UBERON:0000165,2.89e-15,29;UBERON:0000930,2.89e-15,29;UBERON:0001007,5.95e-13,145;UBERON:0001555,5.95e-13,145;UBERON:0007026,5.95e-13,145;UBERON:0001041,3.21e-11,87;UBERON:0000065,4.67e-11,54;UBERON:0004921,6.12e-11,118;UBERON:0001444,2.02e-10,49;UBERON:0000153,9.56e-10,62;UBERON:0007811,9.56e-10,62;UBERON:0003408,1.97e-09,10;UBERON:0001723,2.09e-09,3;UBERON:0001033,2.09e-09,3;UBERON:0010056,2.09e-09,3;UBERON:0007196,2.97e-09,15;UBERON:0001558,2.97e-09,15;UBERON:0000033,1.25e-08,56;UBERON:0006947,1.70e-08,3;UBERON:0004054,1.70e-08,3;UBERON:0000365,2.41e-08,5;UBERON:0004815,3.17e-08,3;UBERON:0002031,3.17e-08,3;UBERON:0005178,4.69e-08,34;UBERON:0002224,4.69e-08,34;UBERON:0005181,9.38e-08,35;UBERON:0003102,1.50e-07,99;UBERON:0001911,1.56e-07,4;UBERON:0005333,1.56e-07,4;UBERON:0008425,1.56e-07,4;UBERON:0005311,1.56e-07,4;UBERON:0003343,4.04e-07,4;UBERON:0004785,4.04e-07,4;UBERON:0005910,5.91e-07,6;UBERON:0000974,8.17e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,8.27479102031034,1.8072355126695,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47559303686716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.327447688744282,12.3860398019464,27.4380487660478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3686085549842,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,5.62008766288098,4.02115889646523,3.98130314181677,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,121.172681216954,100.849976664345,89.7115469246594,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.802025881213139,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.413509717453592,0,0,0.426133137080504,0.534192213880424,4.62797763010739,16.1439656586689,51.1726977103282,8.19378024929954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.865999014529609,3.35151137767894,1.08890984861323,0.282431402330337,2.15252686335615,10.1082885400575,6.65145230305014,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0.111443384277478,0,0.71623345421307,2.07875276582847,4.91457123358771,0,0,0,0,1.05562704063997,0.19924798825107,0,0,0,0,0,0.0898683511473268,13.9636516246975,0,7.29961201713309,0,0,0,0,0,0.520855522170466,0.0874599999961957,3.62499787717397,0,3.30529745380596,0.945550727071745,2.41320361269025,0,0,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,10.7615540412649,0,7.49710365413842,1.20990716048664,0,0,0,0,0,0,0,0,0,0,5.55391162672419,0,0.435296032902013,6.46488672495512,0,0,0,0,21.9195177263828,0,8.3612874088797,0,0,0,32.2659781512425,0,66.597334358678,0,0,0,0,0,0,90.7422033274662,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,22.4402566821805,0,0.670869375198532,0.472834243795189,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,1.9221734262185,0.314408610199332,2.89967338743037,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,1.07220795687463,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.699397538597222,6.8428498603627,0,0,0,0.327628914576042,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.129427695482,0,7.15371534234548,48.2897284508414,0,0,0,0.0752103283492573,0,5.47059807863165,0,0,32.3804828815329,0,0,0,0,0,1.64477330057155,2.97726707033577,0,9.45441964533005,0,0,0,0,0.443511850813194,0,0.514464028312255,0,0,0.118193840883968,0.111231401892069,5.0235579424329,0,0,0,0,0,0.428859265059938,0,0,0,0,5.38762026823896,115.234972038416,18.6640108689805,14.6277301998894,0,0,3.38709640152743,38.2608470468564,0,0,0.111855431797792,0.098150233615243,4.75479907430851,0,0,0,10.6856418473011,0.467878926924211,0,0,0,0,0,0.463044948647668,0,0,5.88355972209373,0,0,0,0,0,0,0.322289439867886,0,6.07083391259236,0,0.481448200135009,0,15.5967956357544,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,46.9114760182158,2.14257988317366,0.0645889098360061,0.0620747142958579,0,0,0,21.3362412939022,10.6092323336437,12.9315941788008,2.58199939413635,3.32660356546013,0.244209805832924,0,0,0,0,0,0.406896178315738,4.66029741929859,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,8.27479102031034,1.8072355126695,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47559303686716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.327447688744282,12.3860398019464,27.4380487660478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3686085549842,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,5.62008766288098,4.02115889646523,3.98130314181677,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,121.172681216954,100.849976664345,89.7115469246594,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.802025881213139,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.413509717453592,0,0,0.426133137080504,0.534192213880424,4.62797763010739,16.1439656586689,51.1726977103282,8.19378024929954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.865999014529609,3.35151137767894,1.08890984861323,0.282431402330337,2.15252686335615,10.1082885400575,6.65145230305014,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0.111443384277478,0,0.71623345421307,2.07875276582847,4.91457123358771,0,0,0,0,1.05562704063997,0.19924798825107,0,0,0,0,0,0.0898683511473268,13.9636516246975,0,7.29961201713309,0,0,0,0,0,0.520855522170466,0.0874599999961957,3.62499787717397,0,3.30529745380596,0.945550727071745,2.41320361269025,0,0,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,10.7615540412649,0,7.49710365413842,1.20990716048664,0,0,0,0,0,0,0,0,0,0,5.55391162672419,0,0.435296032902013,6.46488672495512,0,0,0,0,21.9195177263828,0,8.3612874088797,0,0,0,32.2659781512425,0,66.597334358678,0,0,0,0,0,0,90.7422033274662,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,22.4402566821805,0,0.670869375198532,0.472834243795189,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,1.9221734262185,0.314408610199332,2.89967338743037,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,1.07220795687463,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.699397538597222,6.8428498603627,0,0,0,0.327628914576042,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.129427695482,0,7.15371534234548,48.2897284508414,0,0,0,0.0752103283492573,0,5.47059807863165,0,0,32.3804828815329,0,0,0,0,0,1.64477330057155,2.97726707033577,0,9.45441964533005,0,0,0,0,0.443511850813194,0,0.514464028312255,0,0,0.118193840883968,0.111231401892069,5.0235579424329,0,0,0,0,0,0.428859265059938,0,0,0,0,5.38762026823896,115.234972038416,18.6640108689805,14.6277301998894,0,0,3.38709640152743,38.2608470468564,0,0,0.111855431797792,0.098150233615243,4.75479907430851,0,0,0,10.6856418473011,0.467878926924211,0,0,0,0,0,0.463044948647668,0,0,5.88355972209373,0,0,0,0,0,0,0.322289439867886,0,6.07083391259236,0,0.481448200135009,0,15.5967956357544,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,46.9114760182158,2.14257988317366,0.0645889098360061,0.0620747142958579,0,0,0,21.3362412939022,10.6092323336437,12.9315941788008,2.58199939413635,3.32660356546013,0.244209805832924,0,0,0,0,0,0.406896178315738,4.66029741929859,0,0 | ||
|short_description=p1@SYT8 | |||
}} | }} |
Latest revision as of 03:01, 17 September 2015
Short description: | p1@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | 0bp_to_ENST00000424556_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | F8WBL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.19e-25 | 42 |
endodermal cell | 2.45e-18 | 58 |
respiratory epithelial cell | 4.64e-18 | 13 |
epithelial cell of alimentary canal | 7.13e-12 | 20 |
transitional epithelial cell | 2.00e-10 | 4 |
urothelial cell | 2.00e-10 | 4 |
epithelial cell of tracheobronchial tree | 2.33e-09 | 9 |
epithelial cell of lower respiratory tract | 2.33e-09 | 9 |
acinar cell of salivary gland | 2.99e-09 | 3 |
epithelial cell | 3.04e-09 | 253 |
bronchial epithelial cell | 3.17e-08 | 3 |
mammary gland epithelial cell | 1.56e-07 | 4 |
corneal epithelial cell | 8.84e-07 | 2 |