FFCP PHASE1:Hg19::chr4:186392843..186392862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256309 | |EntrezGene=256309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28504 | |HGNC=28504 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCR3,D6RDN4 | |UniProt=D6RCR3,D6RDN4 | ||
|association_with_transcript=0bp_to_ENST00000393540,ENST00000504020,ENST00000506876_5end | |association_with_transcript=0bp_to_ENST00000393540,ENST00000504020,ENST00000506876_5end | ||
|cluster_id=chr4:186392843..186392862,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_CCDC110_5end | |description=CAGE_peak_3_at_CCDC110_5end | ||
|id=chr4:186392843..186392862,- | |id=chr4:186392843..186392862,- | ||
|ontology_enrichment_celltype=CL:1001319!3.07e-16!1;CL:1000600!3.07e-16!1 | |ontology_enrichment_celltype=CL:1001319!3.07e-16!1;CL:1000600!3.07e-16!1 | ||
|ontology_enrichment_celltype_v019=CL:0002543;1.57e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease=DOID:4960!1.41e-16!1;DOID:0070004!1.41e-16!1 | |ontology_enrichment_disease=DOID:4960!1.41e-16!1;DOID:0070004!1.41e-16!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.21e-16!1;UBERON:0004645!3.07e-16!1;UBERON:0001256!3.07e-16!1;UBERON:0001259!3.07e-16!1;UBERON:0003135!2.39e-13!11;UBERON:0001876!6.42e-09!2;UBERON:0001897!8.09e-09!2;UBERON:0000473!8.62e-09!8;UBERON:0001255!8.74e-09!2;UBERON:0001556!8.74e-09!2;UBERON:0003101!5.98e-07!22;UBERON:0000079!5.98e-07!22 | |ontology_enrichment_uberon=UBERON:0001301!1.21e-16!1;UBERON:0004645!3.07e-16!1;UBERON:0001256!3.07e-16!1;UBERON:0001259!3.07e-16!1;UBERON:0003135!2.39e-13!11;UBERON:0001876!6.42e-09!2;UBERON:0001897!8.09e-09!2;UBERON:0000473!8.62e-09!8;UBERON:0001255!8.74e-09!2;UBERON:0001556!8.74e-09!2;UBERON:0003101!5.98e-07!22;UBERON:0000079!5.98e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0001638;8.85e-07;9!UBERON:0003920;8.85e-07;9!UBERON:0004582;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9 | |||
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|short_description=p3@CCDC110 | |short_description=p3@CCDC110 | ||
}} | }} |
Latest revision as of 03:32, 17 September 2015
Short description: | p3@CCDC110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC110_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000393540, ENST00000504020, ENST00000506876_5end |
EntrezGene: | CCDC110 |
HGNC: | 28504 |
UniProt: | D6RCR3D6RDN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |