FFCP PHASE1:Hg19::chr15:31619570..31619615,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:31619570..31619615,+
|short_description=p6@KLF13
|description=CAGE_peak_6_at_KLF13_5end
|association_with_transcript=-154bp_to_ENST00000558921_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51621 | |EntrezGene=51621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |HGNC=13672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_ENST00000558921_5end | |||
|cluster_id=chr15:31619570..31619615,+ | |||
|description=CAGE_peak_6_at_KLF13_5end | |||
|id=chr15:31619570..31619615,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.95e-29!76;CL:0000839!4.73e-26!70;CL:0000557!5.20e-26!71;CL:0002009!5.39e-25!65;CL:0002194!8.69e-24!63;CL:0000576!8.69e-24!63;CL:0000040!8.69e-24!63;CL:0000559!8.69e-24!63;CL:0002057!9.82e-21!42;CL:0000860!2.76e-20!45;CL:0000763!8.10e-20!112;CL:0000049!8.10e-20!112;CL:0000738!2.31e-17!140;CL:0002031!6.20e-14!124;CL:0000037!8.82e-12!172;CL:0000566!8.82e-12!172;CL:0002087!9.63e-12!119;CL:0002032!1.15e-11!165;CL:0000837!1.15e-11!165;CL:0000988!7.10e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-21;33!CL:0002057;2.04e-21;33!CL:0000473;1.50e-20;39!CL:0000234;1.50e-20;39!CL:0000576;1.10e-16;48!CL:0000766;1.71e-15;69!CL:0000094;1.61e-07;8!CL:0000763;9.11e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.91e-37,72;CL:0000839,1.18e-32,66;CL:0000557,1.36e-32,67;CL:0002009,5.06e-32,61;CL:0002194,2.05e-30,59;CL:0000576,2.05e-30,59;CL:0000040,2.05e-30,59;CL:0000559,2.05e-30,59;CL:0000473,2.29e-30,48;CL:0000234,2.29e-30,48;CL:0000860,5.85e-27,42;CL:0002057,5.85e-27,42;CL:0000763,2.29e-25,108;CL:0000049,2.29e-25,108;CL:0000738,7.39e-22,136;CL:0002031,6.89e-18,120;CL:0002032,1.58e-15,161;CL:0000837,1.58e-15,161;CL:0002087,1.95e-15,115;CL:0000037,2.10e-15,168;CL:0000988,1.34e-13,177;CL:0000094,1.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.05e-20;42!CL:0000049;1.03e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.58e-26!102;UBERON:0003061!8.58e-26!102;UBERON:0002193!5.70e-23!112;UBERON:0002371!7.98e-23!80;UBERON:0001474!2.59e-20!86;UBERON:0004765!1.94e-18!101;UBERON:0001434!1.94e-18!101;UBERON:0007023!2.81e-16!115;UBERON:0002405!1.95e-15!115;UBERON:0003081!1.88e-10!216;UBERON:0002204!5.37e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.30e-31,98;UBERON:0003061,5.30e-31,98;UBERON:0002371,5.69e-28,76;UBERON:0002193,1.63e-27,108;UBERON:0001474,1.18e-24,82;UBERON:0004765,3.50e-23,90;UBERON:0002405,5.38e-22,93;UBERON:0001434,7.27e-22,100;UBERON:0007023,1.92e-15,114;UBERON:0003081,1.68e-10,203;UBERON:0002204,8.76e-08,167 | |||
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| ||
|short_description=p6@KLF13 | |||
}} | }} |
Latest revision as of 03:47, 17 September 2015
Short description: | p6@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000558921_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.91e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.18e-32 | 66 |
granulocyte monocyte progenitor cell | 1.36e-32 | 67 |
macrophage dendritic cell progenitor | 5.06e-32 | 61 |
monopoietic cell | 2.05e-30 | 59 |
monocyte | 2.05e-30 | 59 |
monoblast | 2.05e-30 | 59 |
promonocyte | 2.05e-30 | 59 |
defensive cell | 2.29e-30 | 48 |
phagocyte | 2.29e-30 | 48 |
classical monocyte | 5.85e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.85e-27 | 42 |
myeloid cell | 2.29e-25 | 108 |
common myeloid progenitor | 2.29e-25 | 108 |
leukocyte | 7.39e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 6.89e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.58e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-15 | 161 |
nongranular leukocyte | 1.95e-15 | 115 |
hematopoietic stem cell | 2.10e-15 | 168 |
hematopoietic cell | 1.34e-13 | 177 |
granulocyte | 1.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.30e-31 | 98 |
blood island | 5.30e-31 | 98 |
bone marrow | 5.69e-28 | 76 |
hemolymphoid system | 1.63e-27 | 108 |
bone element | 1.18e-24 | 82 |
skeletal element | 3.50e-23 | 90 |
immune system | 5.38e-22 | 93 |
skeletal system | 7.27e-22 | 100 |
adult organism | 1.92e-15 | 114 |
lateral plate mesoderm | 1.68e-10 | 203 |
musculoskeletal system | 8.76e-08 | 167 |