FFCP PHASE1:Hg19::chr1:153004800..153004809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6699 | |EntrezGene=6699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |HGNC=11260 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETD7 | |UniProt=E7ETD7 | ||
|association_with_transcript=-12bp_to_ENST00000392661,uc009wnx.1_5end | |association_with_transcript=-12bp_to_ENST00000392661,uc009wnx.1_5end | ||
|cluster_id=chr1:153004800..153004809,+ | |||
|coexpression_cluster_id=C197 | |coexpression_cluster_id=C197 | ||
|description=CAGE_peak_6_at_SPRR1B_5end | |description=CAGE_peak_6_at_SPRR1B_5end | ||
|id=chr1:153004800..153004809,+ | |id=chr1:153004800..153004809,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.57e-25!13;CL:0002076!3.60e-21!43;CL:0000622!8.75e-18!5;CL:0000362!6.07e-17!8;CL:0000154!7.60e-15!6;CL:0000223!1.25e-14!59;CL:0000240!1.60e-14!6;CL:0000311!1.60e-14!6;CL:0000079!1.60e-14!6;CL:0000237!1.60e-14!6;CL:0000036!1.60e-14!6;CL:0000357!1.60e-14!6;CL:0000114!1.60e-14!6;CL:0002368!4.57e-14!13;CL:0000317!3.97e-12!2;CL:1000448!3.97e-12!2;CL:0002308!3.97e-12!2;CL:0002140!3.97e-12!2;CL:0000575!4.68e-12!2;CL:0002077!1.15e-11!33;CL:0002251!1.33e-11!21;CL:0000312!2.54e-10!5;CL:0000150!6.24e-10!9;CL:0000066!1.76e-09!254;CL:0002328!2.67e-08!3;CL:0002623!3.68e-08!3;CL:0002621!3.82e-08!3;CL:0000220!3.88e-07!246;CL:0002321!4.85e-07!248 | |ontology_enrichment_celltype=CL:0002159!1.57e-25!13;CL:0002076!3.60e-21!43;CL:0000622!8.75e-18!5;CL:0000362!6.07e-17!8;CL:0000154!7.60e-15!6;CL:0000223!1.25e-14!59;CL:0000240!1.60e-14!6;CL:0000311!1.60e-14!6;CL:0000079!1.60e-14!6;CL:0000237!1.60e-14!6;CL:0000036!1.60e-14!6;CL:0000357!1.60e-14!6;CL:0000114!1.60e-14!6;CL:0002368!4.57e-14!13;CL:0000317!3.97e-12!2;CL:1000448!3.97e-12!2;CL:0002308!3.97e-12!2;CL:0002140!3.97e-12!2;CL:0000575!4.68e-12!2;CL:0002077!1.15e-11!33;CL:0002251!1.33e-11!21;CL:0000312!2.54e-10!5;CL:0000150!6.24e-10!9;CL:0000066!1.76e-09!254;CL:0002328!2.67e-08!3;CL:0002623!3.68e-08!3;CL:0002621!3.82e-08!3;CL:0000220!3.88e-07!246;CL:0002321!4.85e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000622;9.93e-21;5!CL:0000154;1.85e-17;6!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000150;5.52e-12;9!CL:0000362;6.51e-12;9!CL:0002328;1.24e-09;3!CL:0002623;1.24e-09;3!CL:0002159;5.36e-08;14!CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,9.93e-21,5;CL:0000154,1.85e-17,6;CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0000150,5.52e-12,9;CL:0000362,6.51e-12,9;CL:0002328,1.19e-09,3;CL:0002623,1.30e-09,3;CL:0002159,5.36e-08,14;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.78e-26;1!UBERON:0008814;6.43e-14;2!UBERON:0010056;6.43e-14;2 | |||
|ontology_enrichment_disease=DOID:3151!8.03e-07!1;DOID:3149!8.03e-07!1 | |ontology_enrichment_disease=DOID:3151!8.03e-07!1;DOID:3149!8.03e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001723;5.99e-34;3!UBERON:0001033;5.99e-34;3!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0001043;1.10e-09;3!UBERON:0004815;1.24e-09;3!UBERON:0002031;1.24e-09;3!UBERON:0000165;1.11e-08;28!UBERON:0001041;4.11e-08;14!UBERON:0001003;1.59e-07;15!UBERON:0007376;1.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.70e-34,3;UBERON:0001033,7.70e-34,3;UBERON:0010056,7.70e-34,3;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0001042,6.61e-11,10;UBERON:0009145,6.61e-11,10;UBERON:0000166,7.66e-11,22;UBERON:0006562,5.29e-10,11;UBERON:0001043,1.10e-09,3;UBERON:0009143,1.10e-09,3;UBERON:0004815,1.19e-09,3;UBERON:0002031,1.19e-09,3;UBERON:0000165,2.21e-08,29;UBERON:0000930,2.21e-08,29;UBERON:0001003,1.59e-07,15;UBERON:0007376,1.59e-07,15;UBERON:0007383,1.59e-07,15;UBERON:0001041,2.23e-07,87;UBERON:0000161,7.22e-07,36 | |||
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|short_description=p6@SPRR1B | |short_description=p6@SPRR1B | ||
}} | }} |
Latest revision as of 04:28, 17 September 2015
Short description: | p6@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPRR1B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -12bp_to_ENST00000392661, uc009wnx.1_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | E7ETD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 9.93e-21 | 5 |
protein secreting cell | 1.85e-17 | 6 |
sebum secreting cell | 1.21e-13 | 2 |
epithelial cell of sweat gland | 1.21e-13 | 2 |
epithelial cell of skin gland | 1.21e-13 | 2 |
acinar cell of sebaceous gland | 1.21e-13 | 2 |
glandular epithelial cell | 5.52e-12 | 9 |
epidermal cell | 6.51e-12 | 9 |
bronchial epithelial cell | 1.19e-09 | 3 |
acinar cell of salivary gland | 1.30e-09 | 3 |
general ecto-epithelial cell | 5.36e-08 | 14 |
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.70e-34 | 3 |
gustatory system | 7.70e-34 | 3 |
future tongue | 7.70e-34 | 3 |
skin gland | 1.21e-13 | 2 |
epidermis gland | 1.21e-13 | 2 |
gland of integumental system | 1.21e-13 | 2 |
sebaceous gland | 1.21e-13 | 2 |
skin sebaceous gland | 1.21e-13 | 2 |
sweat gland | 1.21e-13 | 2 |
sweat gland placode | 1.21e-13 | 2 |
sebaceous gland placode | 1.21e-13 | 2 |
chordate pharynx | 6.61e-11 | 10 |
pharyngeal region of foregut | 6.61e-11 | 10 |
oral opening | 7.66e-11 | 22 |
pharynx | 5.29e-10 | 11 |
esophagus | 1.10e-09 | 3 |
esophageal region | 1.10e-09 | 3 |
lower respiratory tract epithelium | 1.19e-09 | 3 |
epithelium of bronchus | 1.19e-09 | 3 |
mouth | 2.21e-08 | 29 |
stomodeum | 2.21e-08 | 29 |
skin epidermis | 1.59e-07 | 15 |
outer epithelium | 1.59e-07 | 15 |
enveloping layer of ectoderm | 1.59e-07 | 15 |
foregut | 2.23e-07 | 87 |
orifice | 7.22e-07 | 36 |