FFCP PHASE1:Hg19::chr1:26372568..26372579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7780 | |EntrezGene=7780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11013 | |HGNC=11013 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRI3,B3KSN7 | |UniProt=Q9BRI3,B3KSN7 | ||
|association_with_transcript=24bp_to_ENST00000374278,NM_001004434,NM_032513,uc001blg.1,uc001blh.1_5end | |association_with_transcript=24bp_to_ENST00000374278,NM_001004434,NM_032513,uc001blg.1,uc001blh.1_5end | ||
|cluster_id=chr1:26372568..26372579,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_2_at_SLC30A2_5end | |description=CAGE_peak_2_at_SLC30A2_5end | ||
|id=chr1:26372568..26372579,- | |id=chr1:26372568..26372579,- | ||
|ontology_enrichment_celltype=CL:0002274!1.02e-07!5;CL:0000457!1.02e-07!5;CL:0002191!1.02e-07!5;CL:0000097!1.02e-07!5;CL:0000831!1.02e-07!5;CL:0002028!1.02e-07!5 | |ontology_enrichment_celltype=CL:0002274!1.02e-07!5;CL:0000457!1.02e-07!5;CL:0002191!1.02e-07!5;CL:0000097!1.02e-07!5;CL:0000831!1.02e-07!5;CL:0002028!1.02e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.48e-18;1!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease=DOID:114!5.01e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:178;9.48e-18;1!DOID:326;9.48e-18;1!DOID:3978;9.48e-18;1!DOID:3394;9.48e-18;1!DOID:5844;9.48e-18;1!DOID:114;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.22e-17,1;DOID:326,1.22e-17,1;DOID:3978,1.22e-17,1;DOID:3394,1.22e-17,1;DOID:5844,1.22e-17,1;DOID:114,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.16e-12!115;UBERON:0003127!2.91e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.48e-18;1!UBERON:0000026;9.48e-18;1!UBERON:0008784;9.48e-18;1!UBERON:0006058;9.48e-18;1!UBERON:0003663;9.48e-18;1!UBERON:0004256;9.48e-18;1!UBERON:0004708;9.48e-18;1!UBERON:0002101;9.48e-18;1!UBERON:0004709;9.48e-18;1!UBERON:0002529;9.48e-18;1!UBERON:0010538;9.48e-18;1!UBERON:0003661;9.48e-18;1!UBERON:0010890;9.48e-18;1!UBERON:0002471;9.48e-18;1!UBERON:0001383;9.48e-18;1!UBERON:0010758;9.48e-18;1!UBERON:0010707;9.48e-18;1!UBERON:0000978;9.48e-18;1!UBERON:0002103;9.48e-18;1!UBERON:0001665;9.48e-18;1!UBERON:0003823;9.48e-18;1!UBERON:0000154;9.48e-18;1!UBERON:0010709;9.48e-18;1!UBERON:0005090;1.51e-09;2!UBERON:0001630;1.51e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.23e-18,1;UBERON:0001389,6.23e-18,1;UBERON:0000026,6.23e-18,1;UBERON:0008784,6.23e-18,1;UBERON:0006058,6.23e-18,1;UBERON:0003663,6.23e-18,1;UBERON:0004256,6.23e-18,1;UBERON:0004708,6.23e-18,1;UBERON:0002101,6.23e-18,1;UBERON:0004709,6.23e-18,1;UBERON:0002529,6.23e-18,1;UBERON:0010538,6.23e-18,1;UBERON:0003661,6.23e-18,1;UBERON:0010890,6.23e-18,1;UBERON:0002471,6.23e-18,1;UBERON:0001383,6.23e-18,1;UBERON:0004357,6.23e-18,1;UBERON:0004347,6.23e-18,1;UBERON:0005420,6.23e-18,1;UBERON:0005732,6.23e-18,1;UBERON:0010758,6.23e-18,1;UBERON:0010707,6.23e-18,1;UBERON:0000978,6.23e-18,1;UBERON:0002103,6.23e-18,1;UBERON:0001665,6.23e-18,1;UBERON:0003823,6.23e-18,1;UBERON:0000154,6.23e-18,1;UBERON:0010709,6.23e-18,1;UBERON:0005733,6.23e-18,1;UBERON:0005730,6.23e-18,1;UBERON:0005090,1.22e-09,2;UBERON:0001630,1.22e-09,2;UBERON:0007023,9.12e-09,114 | |||
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| ||
|short_description=p2@SLC30A2 | |short_description=p2@SLC30A2 | ||
}} | }} |
Latest revision as of 04:38, 17 September 2015
Short description: | p2@SLC30A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC30A2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 24bp_to_ENST00000374278, NM_001004434, NM_032513, uc001blg.1, uc001blh.1_5end |
EntrezGene: | SLC30A2 |
HGNC: | 11013 |
UniProt: | Q9BRI3B3KSN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.23e-18 | 1 |
soleus muscle | 6.23e-18 | 1 |
appendage | 6.23e-18 | 1 |
lower limb segment | 6.23e-18 | 1 |
multi-limb segment region | 6.23e-18 | 1 |
hindlimb muscle | 6.23e-18 | 1 |
hindlimb zeugopod muscle | 6.23e-18 | 1 |
paired limb/fin | 6.23e-18 | 1 |
limb | 6.23e-18 | 1 |
pelvic appendage | 6.23e-18 | 1 |
limb segment | 6.23e-18 | 1 |
paired limb/fin segment | 6.23e-18 | 1 |
limb muscle | 6.23e-18 | 1 |
pelvic complex muscle | 6.23e-18 | 1 |
zeugopod | 6.23e-18 | 1 |
muscle of leg | 6.23e-18 | 1 |
paired limb/fin bud | 6.23e-18 | 1 |
limb bud | 6.23e-18 | 1 |
pelvic appendage bud | 6.23e-18 | 1 |
limb/fin field | 6.23e-18 | 1 |
subdivision of organism along appendicular axis | 6.23e-18 | 1 |
appendage girdle complex | 6.23e-18 | 1 |
leg | 6.23e-18 | 1 |
hindlimb | 6.23e-18 | 1 |
triceps surae | 6.23e-18 | 1 |
hindlimb zeugopod | 6.23e-18 | 1 |
posterior region of body | 6.23e-18 | 1 |
pelvic complex | 6.23e-18 | 1 |
limb field | 6.23e-18 | 1 |
hindlimb/pelvic fin field | 6.23e-18 | 1 |
muscle structure | 1.22e-09 | 2 |
muscle organ | 1.22e-09 | 2 |
adult organism | 9.12e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.22e-17 | 1 |
ischemia | 1.22e-17 | 1 |
extrinsic cardiomyopathy | 1.22e-17 | 1 |
myocardial ischemia | 1.22e-17 | 1 |
myocardial infarction | 1.22e-17 | 1 |
heart disease | 1.71e-09 | 2 |