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FFCP PHASE1:Hg19::chr10:135043702..135043729,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=8433
|EntrezGene=8433
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=12634
|HGNC=12634
|TSSclassifier=strong
|UniProt=Q5T230
|UniProt=Q5T230
|association_with_transcript=-48bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end
|association_with_transcript=-48bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end
|cluster_id=chr10:135043702..135043729,+
|coexpression_cluster_id=C128
|description=CAGE_peak_1_at_UTF1_5end
|description=CAGE_peak_1_at_UTF1_5end
|id=chr10:135043702..135043729,+
|id=chr10:135043702..135043729,+
|ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:0002057!1.94e-08!42;CL:0000039!7.30e-08!7;CL:0000586!7.30e-08!7;CL:0000860!1.08e-07!45;CL:0002393!1.28e-07!9;CL:0002397!1.28e-07!9
|ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:0002057!1.94e-08!42;CL:0000039!7.30e-08!7;CL:0000586!7.30e-08!7;CL:0000860!1.08e-07!45;CL:0002393!1.28e-07!9;CL:0002397!1.28e-07!9
|ontology_enrichment_celltype_v019=CL:0002322;4.44e-41;5!CL:0000039;2.29e-19;7!CL:0000586;2.29e-19;7!CL:0002321;1.23e-13;15!CL:0000540;1.48e-12;6!CL:0000404;1.48e-12;6!CL:0000148;5.59e-08;10
|ontology_enrichment_celltype_v019_2=CL:0002322,4.44e-41,5;CL:0000039,2.29e-19,7;CL:0000586,2.29e-19,7;CL:0000540,1.42e-12,6;CL:0000031,1.42e-12,6;CL:0000404,1.42e-12,6;CL:0000047,1.46e-09,8;CL:0000148,5.59e-08,10;CL:0000541,5.59e-08,10
|ontology_enrichment_development_v019=UBERON:0009117;2.47e-39;10!UBERON:0005564;2.47e-39;10!CL:0000031;1.48e-12;6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3095;2.62e-09;22!DOID:2994;2.62e-09;22!DOID:3371;5.28e-09;1!DOID:4549;5.28e-09;1!DOID:5861;5.28e-09;1!DOID:6496;5.28e-09;1!DOID:225;5.28e-09;1
|ontology_enrichment_disease_v019_2=DOID:3095,2.62e-09,22;DOID:2994,2.62e-09,22;DOID:225,4.87e-09,1;DOID:3371,5.28e-09,1;DOID:4549,5.28e-09,1;DOID:5861,5.28e-09,1;DOID:6496,5.28e-09,1
|ontology_enrichment_uberon=UBERON:0000473!1.89e-14!8;UBERON:0003135!2.83e-10!11;UBERON:0000991!1.30e-08!21;UBERON:0009196!1.30e-08!21;UBERON:0009117!1.30e-08!21;UBERON:0005564!1.30e-08!21;UBERON:0004176!3.76e-08!22
|ontology_enrichment_uberon_v019=UBERON:0000473;1.66e-36;8!UBERON:0003135;1.87e-26;11!UBERON:0000991;2.30e-18;21!UBERON:0003101;5.25e-13;22!UBERON:0000079;5.25e-13;22!UBERON:0000922;4.44e-08;49!UBERON:0002323;4.06e-07;45
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.76e-36,8;UBERON:0003135,1.96e-26,11;UBERON:0000991,2.37e-18,21;UBERON:0009196,2.37e-18,21;UBERON:0009117,2.37e-18,21;UBERON:0005564,2.37e-18,21;UBERON:0004176,1.75e-17,22;UBERON:0003101,5.36e-13,22;UBERON:0000079,5.36e-13,22;UBERON:0002323,5.99e-08,46;UBERON:0003133,1.39e-07,48;UBERON:0004458,2.06e-07,49
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|short_description=p1@UTF1
|short_description=p1@UTF1
}}
}}

Latest revision as of 04:45, 17 September 2015

Short description:p1@UTF1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_UTF1_5end
Coexpression cluster:C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP
Association with transcript: -48bp_to_ENST00000304477, NM_003577, uc001lmc.2_5end
EntrezGene:UTF1
HGNC: 12634
UniProt: Q5T230
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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